Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SNRPGP6-201ENST00000451124 220 ntBASIC6.24□□□□□ -1.41
RXRBP28702 BX276092.8-201ENST00000455722 250 ntBASIC6.24□□□□□ -1.41
RXRBP28702 KCTD9P5-201ENST00000504141 1170 ntBASIC6.24□□□□□ -1.41
RXRBP28702 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.24□□□□□ -1.41
RXRBP28702 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.24□□□□□ -1.41
RXRBP28702 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.24□□□□□ -1.41
RXRBP28702 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.24□□□□□ -1.41
RXRBP28702 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.24□□□□□ -1.41
RXRBP28702 AC022878.1-201ENST00000530684 149 ntBASIC6.24□□□□□ -1.41
RXRBP28702 AP003122.4-201ENST00000530980 758 ntBASIC6.24□□□□□ -1.41
RXRBP28702 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.24□□□□□ -1.41
RXRBP28702 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.24□□□□□ -1.41
RXRBP28702 DUX4L52-201ENST00000549363 777 ntBASIC6.24□□□□□ -1.41
RXRBP28702 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC6.24□□□□□ -1.41
RXRBP28702 FAM106CP-201ENST00000582212 507 ntBASIC6.24□□□□□ -1.41
RXRBP28702 AC060780.2-201ENST00000589047 198 ntBASIC6.24□□□□□ -1.41
RXRBP28702 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.24□□□□□ -1.41
RXRBP28702 AC112191.3-201ENST00000604371 277 ntBASIC6.24□□□□□ -1.41
RXRBP28702 AC096577.2-201ENST00000611455 153 ntBASIC6.24□□□□□ -1.41
RXRBP28702 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RXRBP28702 AC084757.4-201ENST00000616350 526 ntBASIC6.24□□□□□ -1.41
RXRBP28702 AC099669.2-201ENST00000616549 437 ntBASIC6.24□□□□□ -1.41
RXRBP28702 AC138305.3-201ENST00000624988 240 ntBASIC6.24□□□□□ -1.41
RXRBP28702 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RXRBP28702 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RXRBP28702 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RXRBP28702 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RXRBP28702 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
RXRBP28702 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RXRBP28702 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.24□□□□□ -1.41
RXRBP28702 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RXRBP28702 AC090017.1-201ENST00000548612 1779 ntBASIC6.23□□□□□ -1.41
RXRBP28702 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RXRBP28702 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RXRBP28702 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RXRBP28702 AC008758.3-201ENST00000507003 1829 ntBASIC6.23□□□□□ -1.41
RXRBP28702 Y_RNA.1-201ENST00000352915 104 ntBASIC6.23□□□□□ -1.41
RXRBP28702 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RXRBP28702 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RXRBP28702 Y_RNA.72-201ENST00000362894 103 ntBASIC6.23□□□□□ -1.41
RXRBP28702 RNU6-839P-201ENST00000363347 108 ntBASIC6.23□□□□□ -1.41
RXRBP28702 RNU1-132P-201ENST00000364300 164 ntBASIC6.23□□□□□ -1.41
RXRBP28702 SNORA51.2-201ENST00000364595 132 ntBASIC6.23□□□□□ -1.41
RXRBP28702 NDUFB4P4-201ENST00000404822 243 ntBASIC6.23□□□□□ -1.41
RXRBP28702 RNU6-908P-201ENST00000410160 94 ntBASIC6.23□□□□□ -1.41
RXRBP28702 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.23□□□□□ -1.41
RXRBP28702 COX6CP13-201ENST00000428703 226 ntBASIC6.23□□□□□ -1.41
RXRBP28702 SKP1P3-201ENST00000429280 487 ntBASIC6.23□□□□□ -1.41
RXRBP28702 RPL37P21-201ENST00000435890 276 ntBASIC6.23□□□□□ -1.41
RXRBP28702 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RXRBP28702 RPL22P17-201ENST00000438729 315 ntBASIC6.23□□□□□ -1.41
RXRBP28702 RABEPKP1-201ENST00000440529 1026 ntBASIC6.23□□□□□ -1.41
RXRBP28702 MTND6P13-201ENST00000443510 523 ntBASIC6.23□□□□□ -1.41
RXRBP28702 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.23□□□□□ -1.41
RXRBP28702 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.23□□□□□ -1.41
RXRBP28702 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.23□□□□□ -1.41
RXRBP28702 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.23□□□□□ -1.41
RXRBP28702 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.23□□□□□ -1.41
RXRBP28702 HMGN2P47-201ENST00000559378 272 ntBASIC6.23□□□□□ -1.41
RXRBP28702 SNORD39.2-201ENST00000579995 76 ntBASIC6.23□□□□□ -1.41
RXRBP28702 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.23□□□□□ -1.41
RXRBP28702 MIR4433B-201ENST00000581329 102 ntBASIC6.23□□□□□ -1.41
RXRBP28702 AC053481.4-201ENST00000583164 216 ntBASIC6.23□□□□□ -1.41
RXRBP28702 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC6.23□□□□□ -1.41
RXRBP28702 RPL7P50-201ENST00000600588 727 ntBASIC6.23□□□□□ -1.41
RXRBP28702 AL138721.1-201ENST00000616756 179 ntBASIC6.23□□□□□ -1.41
RXRBP28702 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.23□□□□□ -1.41
RXRBP28702 ADAM24P-201ENST00000398655 2101 ntBASIC6.23□□□□□ -1.41
RXRBP28702 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.23□□□□□ -1.41
RXRBP28702 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RXRBP28702 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RXRBP28702 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RXRBP28702 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.23□□□□□ -1.41
RXRBP28702 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RXRBP28702 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RXRBP28702 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
RXRBP28702 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.22□□□□□ -1.41
RXRBP28702 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RXRBP28702 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RXRBP28702 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.22□□□□□ -1.41
RXRBP28702 RNA5SP453-201ENST00000362503 119 ntBASIC6.22□□□□□ -1.41
RXRBP28702 RNA5SP119-201ENST00000362715 117 ntBASIC6.22□□□□□ -1.41
RXRBP28702 RNU6-1085P-201ENST00000363576 107 ntBASIC6.22□□□□□ -1.41
RXRBP28702 RNU4-7P-201ENST00000364758 141 ntBASIC6.22□□□□□ -1.41
RXRBP28702 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RXRBP28702 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.22□□□□□ -1.41
RXRBP28702 AL590806.1-201ENST00000415818 853 ntBASIC6.22□□□□□ -1.41
RXRBP28702 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.22□□□□□ -1.41
RXRBP28702 SAR1AP4-201ENST00000429225 591 ntBASIC6.22□□□□□ -1.41
RXRBP28702 RPS29P7-201ENST00000439662 171 ntBASIC6.22□□□□□ -1.41
RXRBP28702 HMGB3P9-201ENST00000441799 583 ntBASIC6.22□□□□□ -1.41
RXRBP28702 H2AFZP5-201ENST00000446960 382 ntBASIC6.22□□□□□ -1.41
RXRBP28702 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.22□□□□□ -1.41
RXRBP28702 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.22□□□□□ -1.41
RXRBP28702 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.22□□□□□ -1.41
RXRBP28702 ACTR3P3-201ENST00000480448 893 ntBASIC6.22□□□□□ -1.41
RXRBP28702 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.22□□□□□ -1.41
RXRBP28702 RNU6-1004P-201ENST00000516584 111 ntBASIC6.22□□□□□ -1.41
RXRBP28702 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.22□□□□□ -1.41
RXRBP28702 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 230.1 ms