Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC092326.2-201ENST00000624772 1561 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL6A2P12110 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL6A2P12110 MTND5P33-201ENST00000571250 1450 ntBASIC5.06□□□□□ -1.6
COL6A2P12110 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL6A2P12110 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.06□□□□□ -1.6
COL6A2P12110 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
COL6A2P12110 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
COL6A2P12110 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
COL6A2P12110 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL6A2P12110 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL6A2P12110 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
COL6A2P12110 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.05□□□□□ -1.6
COL6A2P12110 AC009229.4-201ENST00000623854 1947 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL6A2P12110 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL6A2P12110 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COL6A2P12110 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL6A2P12110 RNY3P3-201ENST00000363816 102 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC019155.1-201ENST00000382242 574 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 RNU6-878P-201ENST00000384578 110 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL6A2P12110 RPS4XP8-201ENST00000402039 771 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.05□□□□□ -1.6
COL6A2P12110 RNA5SP118-201ENST00000410385 109 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 RN7SKP293-201ENST00000411389 296 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC069218.2-201ENST00000411665 344 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.05□□□□□ -1.6
COL6A2P12110 RPL35AP24-201ENST00000413846 330 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 MTATP6P18-201ENST00000417994 673 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL6A2P12110 AC012065.2-201ENST00000421295 375 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC079355.1-201ENST00000421770 223 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.05□□□□□ -1.6
COL6A2P12110 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.05□□□□□ -1.6
COL6A2P12110 OR2AH1P-201ENST00000425717 928 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 MTND1P14-201ENST00000427400 950 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AL590233.1-201ENST00000430017 456 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 CYCSP12-201ENST00000437729 300 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.05□□□□□ -1.6
COL6A2P12110 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.05□□□□□ -1.6
COL6A2P12110 AL049734.2-201ENST00000441066 616 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 USP9YP15-201ENST00000442391 422 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.05□□□□□ -1.6
COL6A2P12110 SNRPGP6-201ENST00000451124 220 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AL356981.1-201ENST00000454879 684 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.05□□□□□ -1.6
COL6A2P12110 Z92846.1-201ENST00000456203 268 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 PMCHL2-203ENST00000457791 237 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC023141.9-201ENST00000458734 412 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 RNU6-420P-201ENST00000458780 107 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 RN7SL443P-201ENST00000464331 290 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC083798.1-201ENST00000472671 131 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.05□□□□□ -1.6
COL6A2P12110 RN7SL466P-201ENST00000497546 295 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC010587.1-201ENST00000505809 469 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL6A2P12110 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.05□□□□□ -1.6
COL6A2P12110 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.05□□□□□ -1.6
COL6A2P12110 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.05□□□□□ -1.6
COL6A2P12110 CENPUP1-201ENST00000526649 1202 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC022404.1-201ENST00000555320 273 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.05□□□□□ -1.6
COL6A2P12110 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.05□□□□□ -1.6
COL6A2P12110 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.05□□□□□ -1.6
COL6A2P12110 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.05□□□□□ -1.6
COL6A2P12110 AC128687.2-201ENST00000609657 566 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AL121757.2-201ENST00000611223 313 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC010133.1-201ENST00000615809 842 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.05□□□□□ -1.6
COL6A2P12110 AC091953.2-201ENST00000623979 160 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 AC009161.2-201ENST00000624626 138 ntBASIC5.05□□□□□ -1.6
COL6A2P12110 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL6A2P12110 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COL6A2P12110 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
COL6A2P12110 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.05□□□□□ -1.6
COL6A2P12110 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL6A2P12110 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.05□□□□□ -1.6
COL6A2P12110 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL6A2P12110 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL6A2P12110 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
COL6A2P12110 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL6A2P12110 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
COL6A2P12110 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.04□□□□□ -1.6
COL6A2P12110 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL6A2P12110 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
COL6A2P12110 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.04□□□□□ -1.6
COL6A2P12110 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL6A2P12110 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
COL6A2P12110 SSXP10-201ENST00000402595 565 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 AL356421.1-201ENST00000403255 413 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.04□□□□□ -1.6
COL6A2P12110 RPL31P45-201ENST00000419532 356 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 EI24P4-201ENST00000423683 1078 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 AL513185.2-201ENST00000425543 193 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.04□□□□□ -1.6
COL6A2P12110 AL035410.1-201ENST00000427409 427 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 RPS20P1-201ENST00000434853 354 ntBASIC5.04□□□□□ -1.6
COL6A2P12110 RPL7P54-201ENST00000438336 674 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms