Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
COL6A1P12109 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A1P12109 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A1P12109 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.33□□□□□ -1.56
COL6A1P12109 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A1P12109 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A1P12109 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A1P12109 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A1P12109 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A1P12109 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A1P12109 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A1P12109 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A1P12109 AC008033.1-201ENST00000216407 1162 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL6A1P12109 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL6A1P12109 Y_RNA.25-201ENST00000362528 102 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 RNU6-462P-201ENST00000362659 105 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 RN7SKP280-201ENST00000364196 304 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 Y_RNA.573-201ENST00000384763 105 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 CCNG1P1-201ENST00000406783 885 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 TMBIM7P-201ENST00000418074 855 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 RPL7P30-201ENST00000420888 709 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A1P12109 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A1P12109 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A1P12109 MTND1P14-201ENST00000427400 950 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 TIMM9P3-201ENST00000428659 274 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 NPM1P34-201ENST00000428821 893 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A1P12109 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A1P12109 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A1P12109 AC073614.1-201ENST00000438690 650 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 MTND1P11-201ENST00000456661 876 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 AMD1P1-201ENST00000457220 922 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A1P12109 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A1P12109 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A1P12109 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A1P12109 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A1P12109 STMN1P2-201ENST00000508435 439 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A1P12109 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A1P12109 PTGES3P3-201ENST00000511479 482 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 SAP18P1-201ENST00000512058 390 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 RNU6-507P-201ENST00000516045 100 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
COL6A1P12109 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A1P12109 OR5BC1P-201ENST00000529327 739 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A1P12109 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A1P12109 LSM3P2-201ENST00000551246 273 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 AC025884.1-201ENST00000556034 378 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 AL049839.1-201ENST00000556151 657 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A1P12109 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A1P12109 MTCYBP13-201ENST00000578634 1093 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A1P12109 AL365503.1-201ENST00000605247 905 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 AL158211.4-201ENST00000606988 584 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 OR6R2P-201ENST00000609216 300 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A1P12109 AC128687.2-201ENST00000609657 566 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 AC114781.5-201ENST00000615297 108 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 MIR6864-201ENST00000617935 70 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 MIR6715B-201ENST00000637172 77 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A1P12109 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A1P12109 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.32□□□□□ -1.56
COL6A1P12109 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A1P12109 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A1P12109 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A1P12109 AC008758.3-201ENST00000507003 1829 ntBASIC5.32□□□□□ -1.56
COL6A1P12109 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A1P12109 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A1P12109 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A1P12109 AP001029.2-203ENST00000589795 4910 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL6A1P12109 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.31□□□□□ -1.56
COL6A1P12109 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL6A1P12109 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL6A1P12109 CBX3P1-201ENST00000325243 554 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 RNU4-76P-201ENST00000364509 141 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 RNU6-876P-201ENST00000391295 104 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.31□□□□□ -1.56
COL6A1P12109 AC004987.3-201ENST00000413879 771 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.31□□□□□ -1.56
COL6A1P12109 BOLA3P4-201ENST00000418151 400 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 AC140479.3-201ENST00000418944 1126 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 AC083875.1-201ENST00000419509 405 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
COL6A1P12109 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.31□□□□□ -1.56
COL6A1P12109 Z95327.1-201ENST00000446082 482 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 RPL7P59-201ENST00000447700 943 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 RPL39P6-201ENST00000448289 150 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 USP9YP12-201ENST00000450481 570 ntBASIC5.31□□□□□ -1.56
COL6A1P12109 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.31□□□□□ -1.56
COL6A1P12109 AL691482.1-201ENST00000453255 87 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms