Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.48□□□□□ -1.85
TPM1P09493 AC009093.8-201ENST00000641769 292 ntBASIC3.48□□□□□ -1.85
TPM1P09493 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.48□□□□□ -1.85
TPM1P09493 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TPM1P09493 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TPM1P09493 MTND4P8-201ENST00000514997 1362 ntBASIC3.48□□□□□ -1.85
TPM1P09493 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TPM1P09493 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.47□□□□□ -1.85
TPM1P09493 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TPM1P09493 RNU6-50P-201ENST00000362356 103 ntBASIC3.47□□□□□ -1.85
TPM1P09493 SNORA5A-201ENST00000384111 134 ntBASIC3.47□□□□□ -1.85
TPM1P09493 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.47□□□□□ -1.85
TPM1P09493 RPL31P1-201ENST00000398116 372 ntBASIC3.47□□□□□ -1.85
TPM1P09493 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.47□□□□□ -1.85
TPM1P09493 AL354719.1-201ENST00000406535 843 ntBASIC3.47□□□□□ -1.85
TPM1P09493 Z86062.1-201ENST00000406773 777 ntBASIC3.47□□□□□ -1.85
TPM1P09493 RNA5SP274-201ENST00000410484 108 ntBASIC3.47□□□□□ -1.85
TPM1P09493 VTA1P1-201ENST00000414044 866 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.47□□□□□ -1.85
TPM1P09493 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.47□□□□□ -1.85
TPM1P09493 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.47□□□□□ -1.85
TPM1P09493 RPL21P40-201ENST00000428586 483 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AC004975.1-201ENST00000428733 208 ntBASIC3.47□□□□□ -1.85
TPM1P09493 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.47□□□□□ -1.85
TPM1P09493 RPL17P49-201ENST00000443728 411 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AC097499.1-201ENST00000444277 208 ntBASIC3.47□□□□□ -1.85
TPM1P09493 COX6CP2-201ENST00000444980 225 ntBASIC3.47□□□□□ -1.85
TPM1P09493 PLGLA-201ENST00000465668 449 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AC106707.2-201ENST00000484182 374 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AC090543.1-201ENST00000492168 485 ntBASIC3.47□□□□□ -1.85
TPM1P09493 CEACAMP10-202ENST00000495431 496 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.47□□□□□ -1.85
TPM1P09493 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.47□□□□□ -1.85
TPM1P09493 SNORA31.26-201ENST00000517250 137 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.47□□□□□ -1.85
TPM1P09493 AL442163.2-201ENST00000553912 710 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.47□□□□□ -1.85
TPM1P09493 AC067959.1-201ENST00000604334 379 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AC011374.2-201ENST00000607135 526 ntBASIC3.47□□□□□ -1.85
TPM1P09493 OR2BH1P-201ENST00000608850 864 ntBASIC3.47□□□□□ -1.85
TPM1P09493 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.47□□□□□ -1.85
TPM1P09493 uc_338.25-201ENST00000613756 156 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AF117829.1-206ENST00000621883 3802 ntBASIC3.47□□□□□ -1.85
TPM1P09493 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.47□□□□□ -1.85
TPM1P09493 LINC00216-201ENST00000623548 1126 ntBASIC3.47□□□□□ -1.85
TPM1P09493 LRRC77P-213ENST00000637727 880 ntBASIC3.47□□□□□ -1.85
TPM1P09493 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TPM1P09493 ZNF285B-201ENST00000561698 1767 ntBASIC3.47□□□□□ -1.85
TPM1P09493 Z83843.1-201ENST00000604070 3685 ntBASIC3.47□□□□□ -1.85
TPM1P09493 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.47□□□□□ -1.85
TPM1P09493 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.47□□□□□ -1.85
TPM1P09493 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TPM1P09493 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.46□□□□□ -1.85
TPM1P09493 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.46□□□□□ -1.85
TPM1P09493 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.46□□□□□ -1.86
TPM1P09493 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.46□□□□□ -1.86
TPM1P09493 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TPM1P09493 SFR1P1-201ENST00000403720 688 ntBASIC3.46□□□□□ -1.86
TPM1P09493 DHFRP5-201ENST00000406944 564 ntBASIC3.46□□□□□ -1.86
TPM1P09493 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.46□□□□□ -1.86
TPM1P09493 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.46□□□□□ -1.86
TPM1P09493 EIF2S2P3-201ENST00000428356 999 ntBASIC3.46□□□□□ -1.86
TPM1P09493 AL035246.1-201ENST00000433554 1255 ntBASIC3.46□□□□□ -1.86
TPM1P09493 SETP8-201ENST00000435341 628 ntBASIC3.46□□□□□ -1.86
TPM1P09493 YWHAZP8-201ENST00000436935 731 ntBASIC3.46□□□□□ -1.86
TPM1P09493 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.46□□□□□ -1.86
TPM1P09493 HMGB1P15-201ENST00000453854 435 ntBASIC3.46□□□□□ -1.86
TPM1P09493 RPL21P8-201ENST00000465083 535 ntBASIC3.46□□□□□ -1.86
TPM1P09493 RN7SL385P-201ENST00000468873 276 ntBASIC3.46□□□□□ -1.86
TPM1P09493 AC010285.1-201ENST00000470580 392 ntBASIC3.46□□□□□ -1.86
TPM1P09493 RPS26P21-201ENST00000475397 348 ntBASIC3.46□□□□□ -1.86
TPM1P09493 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TPM1P09493 MTND4LP31-201ENST00000514859 294 ntBASIC3.46□□□□□ -1.86
TPM1P09493 RN7SKP282-201ENST00000516824 299 ntBASIC3.46□□□□□ -1.86
TPM1P09493 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.46□□□□□ -1.86
TPM1P09493 HMGB1P46-201ENST00000520062 610 ntBASIC3.46□□□□□ -1.86
TPM1P09493 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.46□□□□□ -1.86
TPM1P09493 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.46□□□□□ -1.86
TPM1P09493 MIR4504-201ENST00000577413 92 ntBASIC3.46□□□□□ -1.86
TPM1P09493 AC007448.1-201ENST00000582714 234 ntBASIC3.46□□□□□ -1.86
TPM1P09493 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.46□□□□□ -1.86
TPM1P09493 AC012119.1-201ENST00000603184 222 ntBASIC3.46□□□□□ -1.86
TPM1P09493 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.46□□□□□ -1.86
TPM1P09493 AC069234.5-201ENST00000611056 416 ntBASIC3.46□□□□□ -1.86
TPM1P09493 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
TPM1P09493 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
TPM1P09493 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
TPM1P09493 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.45□□□□□ -1.86
TPM1P09493 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TPM1P09493 OR1S2-201ENST00000302592 978 ntBASIC3.45□□□□□ -1.86
TPM1P09493 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.45□□□□□ -1.86
TPM1P09493 RNU6-837P-201ENST00000391056 108 ntBASIC3.45□□□□□ -1.86
TPM1P09493 SNORA26.7-201ENST00000391288 122 ntBASIC3.45□□□□□ -1.86
TPM1P09493 SAR1AP2-201ENST00000392696 594 ntBASIC3.45□□□□□ -1.86
TPM1P09493 AC073264.1-201ENST00000411508 416 ntBASIC3.45□□□□□ -1.86
TPM1P09493 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.45□□□□□ -1.86
TPM1P09493 AC109780.2-201ENST00000413467 845 ntBASIC3.45□□□□□ -1.86
TPM1P09493 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.45□□□□□ -1.86
TPM1P09493 AL139281.1-201ENST00000422120 335 ntBASIC3.45□□□□□ -1.86
TPM1P09493 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms