Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CTSDP07339 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.49□□□□□ -2.01
CTSDP07339 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AL590103.1-201ENST00000434488 307 ntBASIC2.49□□□□□ -2.01
CTSDP07339 ELOCP11-201ENST00000436690 332 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.49□□□□□ -2.01
CTSDP07339 ELOCP16-201ENST00000444494 332 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.49□□□□□ -2.01
CTSDP07339 RPL39P40-201ENST00000445481 146 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AL358232.1-201ENST00000448030 501 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AC008155.2-201ENST00000464337 397 ntBASIC2.49□□□□□ -2.01
CTSDP07339 RPS29P2-201ENST00000479278 136 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.49□□□□□ -2.01
CTSDP07339 AP001207.1-201ENST00000524051 481 ntBASIC2.49□□□□□ -2.01
CTSDP07339 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CTSDP07339 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.49□□□□□ -2.01
CTSDP07339 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.49□□□□□ -2.01
CTSDP07339 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.49□□□□□ -2.01
CTSDP07339 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.49□□□□□ -2.01
CTSDP07339 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.49□□□□□ -2.01
CTSDP07339 MTCO3P13-201ENST00000577757 781 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AC023043.3-201ENST00000593113 385 ntBASIC2.49□□□□□ -2.01
CTSDP07339 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.49□□□□□ -2.01
CTSDP07339 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.49□□□□□ -2.01
CTSDP07339 AL359198.2-201ENST00000611836 194 ntBASIC2.49□□□□□ -2.01
CTSDP07339 NF1P10-201ENST00000613227 742 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AC105227.2-201ENST00000615075 605 ntBASIC2.49□□□□□ -2.01
CTSDP07339 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.49□□□□□ -2.01
CTSDP07339 AC231759.1-201ENST00000616455 597 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AC138932.5-201ENST00000617759 563 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AC244100.1-202ENST00000621554 382 ntBASIC2.49□□□□□ -2.01
CTSDP07339 AC099506.2-201ENST00000623074 221 ntBASIC2.49□□□□□ -2.01
CTSDP07339 MIR6733-201ENST00000635723 61 ntBASIC2.49□□□□□ -2.01
CTSDP07339 MIR622-201ENST00000638396 96 ntBASIC2.49□□□□□ -2.01
CTSDP07339 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CTSDP07339 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CTSDP07339 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTSDP07339 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CTSDP07339 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTSDP07339 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CTSDP07339 SNORA7.4-201ENST00000384249 137 ntBASIC2.48□□□□□ -2.01
CTSDP07339 RNA5SP171-201ENST00000391071 115 ntBASIC2.48□□□□□ -2.01
CTSDP07339 TAF9BP1-201ENST00000396646 746 ntBASIC2.48□□□□□ -2.01
CTSDP07339 SNORA11-201ENST00000408789 128 ntBASIC2.48□□□□□ -2.01
CTSDP07339 RPL26P37-201ENST00000411983 438 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AC004987.3-201ENST00000413879 771 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.48□□□□□ -2.01
CTSDP07339 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTSDP07339 MUPP-201ENST00000438111 566 ntBASIC2.48□□□□□ -2.01
CTSDP07339 RSL24D1P2-201ENST00000445584 366 ntBASIC2.48□□□□□ -2.01
CTSDP07339 RPL6P5-201ENST00000445678 828 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AC016696.1-201ENST00000446949 318 ntBASIC2.48□□□□□ -2.01
CTSDP07339 RPS4XP10-201ENST00000465034 731 ntBASIC2.48□□□□□ -2.01
CTSDP07339 RPL31P13-201ENST00000484151 370 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AP000926.3-201ENST00000497201 299 ntBASIC2.48□□□□□ -2.01
CTSDP07339 WBP1LP4-201ENST00000505043 344 ntBASIC2.48□□□□□ -2.01
CTSDP07339 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.48□□□□□ -2.01
CTSDP07339 AC108120.2-201ENST00000512973 294 ntBASIC2.48□□□□□ -2.01
CTSDP07339 GMPSP1-201ENST00000514075 579 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.48□□□□□ -2.01
CTSDP07339 RNU6-1004P-201ENST00000516584 111 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AC067904.2-201ENST00000517322 1283 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.48□□□□□ -2.01
CTSDP07339 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.48□□□□□ -2.01
CTSDP07339 AP000857.1-201ENST00000532151 543 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.48□□□□□ -2.01
CTSDP07339 SETP2-201ENST00000553886 926 ntBASIC2.48□□□□□ -2.01
CTSDP07339 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.48□□□□□ -2.01
CTSDP07339 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.48□□□□□ -2.01
CTSDP07339 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CTSDP07339 CKS1BP3-201ENST00000600888 237 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AL031985.2-201ENST00000600955 480 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AC090525.3-201ENST00000605601 189 ntBASIC2.48□□□□□ -2.01
CTSDP07339 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.48□□□□□ -2.01
CTSDP07339 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.48□□□□□ -2.01
CTSDP07339 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CTSDP07339 MIR7975-201ENST00000619350 68 ntBASIC2.48□□□□□ -2.01
CTSDP07339 AC007318.2-201ENST00000620999 243 ntBASIC2.48□□□□□ -2.01
CTSDP07339 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.48□□□□□ -2.01
CTSDP07339 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.48□□□□□ -2.01
CTSDP07339 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.48□□□□□ -2.01
CTSDP07339 AC093010.3-201ENST00000570269 15214 ntBASIC2.48□□□□□ -2.01
CTSDP07339 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CTSDP07339 AC010733.2-201ENST00000589496 5702 ntBASIC2.48□□□□□ -2.01
CTSDP07339 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTSDP07339 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.47□□□□□ -2.01
CTSDP07339 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTSDP07339 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTSDP07339 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTSDP07339 AL355596.1-201ENST00000565399 3996 ntBASIC2.47□□□□□ -2.01
CTSDP07339 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.47□□□□□ -2.01
CTSDP07339 RNU1-35P-201ENST00000362782 153 ntBASIC2.47□□□□□ -2.01
CTSDP07339 RNA5SP72-201ENST00000364442 117 ntBASIC2.47□□□□□ -2.01
CTSDP07339 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CTSDP07339 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CTSDP07339 SNORD67-201ENST00000390833 111 ntBASIC2.47□□□□□ -2.01
CTSDP07339 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CTSDP07339 AL357075.1-201ENST00000404107 726 ntBASIC2.47□□□□□ -2.01
CTSDP07339 RPS3AP25-201ENST00000411660 793 ntBASIC2.47□□□□□ -2.01
CTSDP07339 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms