Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AL049794.2-201ENST00000616301 365 ntBASIC6.8□□□□□ -1.32
ACTN4O43707 AL731566.2-201ENST00000618971 317 ntBASIC6.8□□□□□ -1.32
ACTN4O43707 AC074029.4-201ENST00000624796 1859 ntBASIC6.8□□□□□ -1.32
ACTN4O43707 AL353662.3-201ENST00000625131 237 ntBASIC6.8□□□□□ -1.32
ACTN4O43707 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
ACTN4O43707 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ACTN4O43707 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
ACTN4O43707 AC005224.3-201ENST00000584683 2140 ntBASIC6.8□□□□□ -1.32
ACTN4O43707 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ACTN4O43707 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.8□□□□□ -1.32
ACTN4O43707 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
ACTN4O43707 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
ACTN4O43707 AC107021.2-201ENST00000567714 2095 ntBASIC6.8□□□□□ -1.32
ACTN4O43707 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ACTN4O43707 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ACTN4O43707 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 AC107081.3-201ENST00000612715 2034 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.79□□□□□ -1.32
ACTN4O43707 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 SNORD1C-201ENST00000363315 78 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 Y_RNA.126-201ENST00000363382 111 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 SNORD50B-201ENST00000364995 70 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 RN7SKP126-201ENST00000411143 300 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.79□□□□□ -1.32
ACTN4O43707 RPL23AP69-201ENST00000431134 458 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 CYCSP24-201ENST00000445119 316 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.79□□□□□ -1.32
ACTN4O43707 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.79□□□□□ -1.32
ACTN4O43707 SDC4P-201ENST00000453285 601 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 AC006967.1-201ENST00000467608 589 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.79□□□□□ -1.32
ACTN4O43707 TRBV5-2-201ENST00000489095 273 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 SNRPCP11-201ENST00000492453 205 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 AC083829.1-201ENST00000503756 657 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 SNORA14.1-201ENST00000516113 141 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 IGLVIV-64-201ENST00000518581 301 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.79□□□□□ -1.32
ACTN4O43707 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.79□□□□□ -1.32
ACTN4O43707 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.79□□□□□ -1.32
ACTN4O43707 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.79□□□□□ -1.32
ACTN4O43707 AL049839.1-201ENST00000556151 657 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.79□□□□□ -1.32
ACTN4O43707 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 AC010325.3-201ENST00000641084 394 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 AL161756.3-201ENST00000641216 2071 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.79□□□□□ -1.32
ACTN4O43707 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ACTN4O43707 ZNF72P-201ENST00000425869 1908 ntBASIC6.79□□□□□ -1.32
ACTN4O43707 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.79□□□□□ -1.32
ACTN4O43707 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.79□□□□□ -1.32
ACTN4O43707 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ACTN4O43707 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.78□□□□□ -1.32
ACTN4O43707 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
ACTN4O43707 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
ACTN4O43707 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ACTN4O43707 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
ACTN4O43707 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
ACTN4O43707 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ACTN4O43707 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.78□□□□□ -1.32
ACTN4O43707 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ACTN4O43707 AC092070.2-203ENST00000598377 3644 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ACTN4O43707 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ACTN4O43707 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.78□□□□□ -1.32
ACTN4O43707 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.78□□□□□ -1.32
ACTN4O43707 RNU6-545P-201ENST00000362681 104 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ACTN4O43707 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.78□□□□□ -1.32
ACTN4O43707 RNU6-293P-201ENST00000411259 106 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 RNU6-387P-201ENST00000411331 105 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 DNAJC19P7-201ENST00000428811 344 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.78□□□□□ -1.32
ACTN4O43707 AC098831.1-201ENST00000440661 216 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.78□□□□□ -1.32
ACTN4O43707 AL139109.1-201ENST00000455491 297 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 AC087879.1-201ENST00000474343 374 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 RN7SL836P-201ENST00000476140 296 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.78□□□□□ -1.32
ACTN4O43707 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.78□□□□□ -1.32
ACTN4O43707 FAM60DP-201ENST00000524174 632 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.78□□□□□ -1.32
ACTN4O43707 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.78□□□□□ -1.32
ACTN4O43707 MIR744-201ENST00000578242 98 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.78□□□□□ -1.32
ACTN4O43707 RNF138P2-201ENST00000603490 592 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ACTN4O43707 RNU6-84P-201ENST00000607737 102 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 uc_338.26-201ENST00000612659 160 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 AL352984.2-202ENST00000613699 155 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 AL161423.1-201ENST00000613700 262 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 AL596245.1-201ENST00000618994 362 ntBASIC6.78□□□□□ -1.32
ACTN4O43707 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms