Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPS7P2-201ENST00000435134 607 ntBASIC2.97□□□□□ -1.93
SGCEO43556 AC008280.2-201ENST00000455473 307 ntBASIC2.97□□□□□ -1.93
SGCEO43556 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.97□□□□□ -1.93
SGCEO43556 RPL21P18-201ENST00000469899 480 ntBASIC2.97□□□□□ -1.93
SGCEO43556 AC112198.1-201ENST00000505369 1220 ntBASIC2.97□□□□□ -1.93
SGCEO43556 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.97□□□□□ -1.93
SGCEO43556 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.97□□□□□ -1.93
SGCEO43556 SNORA64.4-201ENST00000516632 81 ntBASIC2.97□□□□□ -1.93
SGCEO43556 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.97□□□□□ -1.93
SGCEO43556 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.97□□□□□ -1.93
SGCEO43556 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.97□□□□□ -1.93
SGCEO43556 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.97□□□□□ -1.93
SGCEO43556 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SGCEO43556 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
SGCEO43556 AC005242.1-201ENST00000585658 438 ntBASIC2.97□□□□□ -1.93
SGCEO43556 AC067852.3-201ENST00000589177 561 ntBASIC2.97□□□□□ -1.93
SGCEO43556 AL109618.2-201ENST00000605527 211 ntBASIC2.97□□□□□ -1.93
SGCEO43556 AC015802.5-201ENST00000607478 399 ntBASIC2.97□□□□□ -1.93
SGCEO43556 MIR6798-201ENST00000612887 67 ntBASIC2.97□□□□□ -1.93
SGCEO43556 AL161637.1-201ENST00000622380 412 ntBASIC2.97□□□□□ -1.93
SGCEO43556 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SGCEO43556 AC073055.1-201ENST00000456901 1621 ntBASIC2.97□□□□□ -1.93
SGCEO43556 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.96□□□□□ -1.94
SGCEO43556 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SGCEO43556 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SGCEO43556 DDX6P1-205ENST00000441966 1436 ntBASIC2.96□□□□□ -1.94
SGCEO43556 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SGCEO43556 RNA5SP197-201ENST00000363357 119 ntBASIC2.96□□□□□ -1.94
SGCEO43556 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.96□□□□□ -1.94
SGCEO43556 RPL5P18-201ENST00000406671 891 ntBASIC2.96□□□□□ -1.94
SGCEO43556 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.96□□□□□ -1.94
SGCEO43556 RNU2-17P-201ENST00000410290 190 ntBASIC2.96□□□□□ -1.94
SGCEO43556 RNU4-65P-201ENST00000410473 140 ntBASIC2.96□□□□□ -1.94
SGCEO43556 RNA5SP31-201ENST00000411144 127 ntBASIC2.96□□□□□ -1.94
SGCEO43556 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.96□□□□□ -1.94
SGCEO43556 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.96□□□□□ -1.94
SGCEO43556 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SGCEO43556 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.96□□□□□ -1.94
SGCEO43556 FAR1P1-201ENST00000427163 934 ntBASIC2.96□□□□□ -1.94
SGCEO43556 AC092017.2-201ENST00000427600 362 ntBASIC2.96□□□□□ -1.94
SGCEO43556 GOT2P5-201ENST00000433995 546 ntBASIC2.96□□□□□ -1.94
SGCEO43556 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.96□□□□□ -1.94
SGCEO43556 AC122718.1-201ENST00000439448 744 ntBASIC2.96□□□□□ -1.94
SGCEO43556 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.96□□□□□ -1.94
SGCEO43556 AC004865.1-201ENST00000442276 1003 ntBASIC2.96□□□□□ -1.94
SGCEO43556 AC068135.1-201ENST00000446164 246 ntBASIC2.96□□□□□ -1.94
SGCEO43556 GAPDHP27-201ENST00000447427 1020 ntBASIC2.96□□□□□ -1.94
SGCEO43556 AC233982.1-201ENST00000451247 436 ntBASIC2.96□□□□□ -1.94
SGCEO43556 HMGB1P15-201ENST00000453854 435 ntBASIC2.96□□□□□ -1.94
SGCEO43556 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.96□□□□□ -1.94
SGCEO43556 RPS15AP1-201ENST00000457423 391 ntBASIC2.96□□□□□ -1.94
SGCEO43556 snoU13.3-201ENST00000459441 104 ntBASIC2.96□□□□□ -1.94
SGCEO43556 FAM133DP-201ENST00000464802 691 ntBASIC2.96□□□□□ -1.94
SGCEO43556 RPL21P8-201ENST00000465083 535 ntBASIC2.96□□□□□ -1.94
SGCEO43556 AC087879.1-201ENST00000474343 374 ntBASIC2.96□□□□□ -1.94
SGCEO43556 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.96□□□□□ -1.94
SGCEO43556 SAP18P1-201ENST00000512058 390 ntBASIC2.96□□□□□ -1.94
SGCEO43556 APOOP4-201ENST00000513530 597 ntBASIC2.96□□□□□ -1.94
SGCEO43556 AC133963.2-201ENST00000513686 578 ntBASIC2.96□□□□□ -1.94
SGCEO43556 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.96□□□□□ -1.94
SGCEO43556 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.96□□□□□ -1.94
SGCEO43556 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.96□□□□□ -1.94
SGCEO43556 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.96□□□□□ -1.94
SGCEO43556 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.96□□□□□ -1.94
SGCEO43556 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.96□□□□□ -1.94
SGCEO43556 AC034105.4-201ENST00000568304 277 ntBASIC2.96□□□□□ -1.94
SGCEO43556 ADAM3B-201ENST00000569937 840 ntBASIC2.96□□□□□ -1.94
SGCEO43556 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.96□□□□□ -1.94
SGCEO43556 U3.45-201ENST00000607547 219 ntBASIC2.96□□□□□ -1.94
SGCEO43556 VIS1.1-201ENST00000610517 203 ntBASIC2.96□□□□□ -1.94
SGCEO43556 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SGCEO43556 AC018926.3-201ENST00000618841 406 ntBASIC2.96□□□□□ -1.94
SGCEO43556 AL392088.2-201ENST00000637607 285 ntBASIC2.96□□□□□ -1.94
SGCEO43556 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SGCEO43556 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SGCEO43556 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.96□□□□□ -1.94
SGCEO43556 AL356274.2-201ENST00000624379 3752 ntBASIC2.96□□□□□ -1.94
SGCEO43556 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SGCEO43556 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SGCEO43556 AC104446.1-201ENST00000613728 1321 ntBASIC2.95□□□□□ -1.94
SGCEO43556 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SGCEO43556 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.95□□□□□ -1.94
SGCEO43556 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SGCEO43556 AC016716.1-201ENST00000265882 708 ntBASIC2.95□□□□□ -1.94
SGCEO43556 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SGCEO43556 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SGCEO43556 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.95□□□□□ -1.94
SGCEO43556 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.95□□□□□ -1.94
SGCEO43556 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.95□□□□□ -1.94
SGCEO43556 AC091286.1-201ENST00000431233 461 ntBASIC2.95□□□□□ -1.94
SGCEO43556 AC244505.4-201ENST00000434905 287 ntBASIC2.95□□□□□ -1.94
SGCEO43556 YWHAZP7-201ENST00000436906 631 ntBASIC2.95□□□□□ -1.94
SGCEO43556 SSXP5-201ENST00000443473 287 ntBASIC2.95□□□□□ -1.94
SGCEO43556 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.95□□□□□ -1.94
SGCEO43556 AC021205.2-201ENST00000480069 347 ntBASIC2.95□□□□□ -1.94
SGCEO43556 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.95□□□□□ -1.94
SGCEO43556 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.95□□□□□ -1.94
SGCEO43556 RN7SKP282-201ENST00000516824 299 ntBASIC2.95□□□□□ -1.94
SGCEO43556 MIR2276-201ENST00000516886 89 ntBASIC2.95□□□□□ -1.94
SGCEO43556 SNORA31.26-201ENST00000517250 137 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms