Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM1O15116 ELOCP13-201ENST00000443934 329 ntBASIC3.34□□□□□ -1.87
LSM1O15116 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM1O15116 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM1O15116 NPM1P13-201ENST00000452663 865 ntBASIC3.34□□□□□ -1.87
LSM1O15116 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM1O15116 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM1O15116 NPM1P41-201ENST00000512920 831 ntBASIC3.34□□□□□ -1.87
LSM1O15116 AP001207.1-201ENST00000524051 481 ntBASIC3.34□□□□□ -1.87
LSM1O15116 AP004371.1-201ENST00000525240 214 ntBASIC3.34□□□□□ -1.87
LSM1O15116 AC004024.1-201ENST00000549244 247 ntBASIC3.34□□□□□ -1.87
LSM1O15116 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM1O15116 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM1O15116 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM1O15116 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM1O15116 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM1O15116 AC008507.1-201ENST00000587506 734 ntBASIC3.34□□□□□ -1.87
LSM1O15116 AL009028.1-201ENST00000604895 802 ntBASIC3.34□□□□□ -1.87
LSM1O15116 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.34□□□□□ -1.87
LSM1O15116 U4.6-201ENST00000621618 127 ntBASIC3.34□□□□□ -1.87
LSM1O15116 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM1O15116 MTCO1P6-201ENST00000481192 1384 ntBASIC3.34□□□□□ -1.88
LSM1O15116 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LSM1O15116 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LSM1O15116 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
LSM1O15116 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LSM1O15116 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM1O15116 SNORD56.4-201ENST00000363883 71 ntBASIC3.33□□□□□ -1.88
LSM1O15116 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LSM1O15116 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LSM1O15116 NPM1P10-201ENST00000398310 865 ntBASIC3.33□□□□□ -1.88
LSM1O15116 AL354719.1-201ENST00000406535 843 ntBASIC3.33□□□□□ -1.88
LSM1O15116 UBE2V1P15-201ENST00000407776 448 ntBASIC3.33□□□□□ -1.88
LSM1O15116 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM1O15116 RPL23AP82-202ENST00000427528 469 ntBASIC3.33□□□□□ -1.88
LSM1O15116 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM1O15116 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM1O15116 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.33□□□□□ -1.88
LSM1O15116 snoU13.24-201ENST00000458998 104 ntBASIC3.33□□□□□ -1.88
LSM1O15116 CENPBD1P1-201ENST00000464061 469 ntBASIC3.33□□□□□ -1.88
LSM1O15116 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM1O15116 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM1O15116 MTCO2P32-201ENST00000514865 403 ntBASIC3.33□□□□□ -1.88
LSM1O15116 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.33□□□□□ -1.88
LSM1O15116 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM1O15116 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM1O15116 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM1O15116 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM1O15116 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM1O15116 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM1O15116 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM1O15116 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
LSM1O15116 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM1O15116 AC067852.3-201ENST00000589177 561 ntBASIC3.33□□□□□ -1.88
LSM1O15116 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.33□□□□□ -1.88
LSM1O15116 AC020914.6-201ENST00000594327 272 ntBASIC3.33□□□□□ -1.88
LSM1O15116 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM1O15116 BNIP3P4-201ENST00000604946 565 ntBASIC3.33□□□□□ -1.88
LSM1O15116 AL451086.1-201ENST00000605596 223 ntBASIC3.33□□□□□ -1.88
LSM1O15116 AC016542.1-201ENST00000608259 493 ntBASIC3.33□□□□□ -1.88
LSM1O15116 AC239803.2-201ENST00000610161 430 ntBASIC3.33□□□□□ -1.88
LSM1O15116 AC003001.2-201ENST00000616294 831 ntBASIC3.33□□□□□ -1.88
LSM1O15116 AC006213.5-201ENST00000619673 288 ntBASIC3.33□□□□□ -1.88
LSM1O15116 AL590396.2-201ENST00000636511 1041 ntBASIC3.33□□□□□ -1.88
LSM1O15116 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
LSM1O15116 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
LSM1O15116 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM1O15116 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
LSM1O15116 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM1O15116 AC032011.1-201ENST00000611703 1549 ntBASIC3.33□□□□□ -1.88
LSM1O15116 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LSM1O15116 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM1O15116 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM1O15116 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM1O15116 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM1O15116 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LSM1O15116 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LSM1O15116 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LSM1O15116 RN7SKP263-201ENST00000411194 309 ntBASIC3.32□□□□□ -1.88
LSM1O15116 RNA5SP107-201ENST00000411358 122 ntBASIC3.32□□□□□ -1.88
LSM1O15116 RPS20P25-201ENST00000412447 352 ntBASIC3.32□□□□□ -1.88
LSM1O15116 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM1O15116 AC009237.2-201ENST00000421358 284 ntBASIC3.32□□□□□ -1.88
LSM1O15116 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM1O15116 FAR1P1-201ENST00000427163 934 ntBASIC3.32□□□□□ -1.88
LSM1O15116 RPL7P2-201ENST00000427639 268 ntBASIC3.32□□□□□ -1.88
LSM1O15116 BX890604.2-201ENST00000427883 474 ntBASIC3.32□□□□□ -1.88
LSM1O15116 AC114973.1-201ENST00000429057 632 ntBASIC3.32□□□□□ -1.88
LSM1O15116 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM1O15116 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM1O15116 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM1O15116 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LSM1O15116 RPL23AP67-201ENST00000465341 474 ntBASIC3.32□□□□□ -1.88
LSM1O15116 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM1O15116 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
LSM1O15116 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM1O15116 AC107934.2-201ENST00000518653 310 ntBASIC3.32□□□□□ -1.88
LSM1O15116 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM1O15116 MED28P5-201ENST00000528254 438 ntBASIC3.32□□□□□ -1.88
LSM1O15116 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms