Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC127502.3-201ENST00000636170 1206 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AC011978.2-201ENST00000569835 2054 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 RNA5SP197-201ENST00000363357 119 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 SNORA48.2-201ENST00000390926 124 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AP000567.1-201ENST00000406413 156 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 RNA5SP120-201ENST00000410900 112 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AL356968.1-201ENST00000416622 474 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 Z77249.1-201ENST00000444622 1175 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 RPL21P10-201ENST00000463521 490 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 TXNP6-201ENST00000510190 310 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 APOOP4-201ENST00000513530 597 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 RNU1-103P-201ENST00000516502 125 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AC093331.1-201ENST00000521474 169 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 HAUS1P3-201ENST00000523909 662 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 U73479.1-201ENST00000618062 168 ntBASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CTNNA3Q9UI47 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CTNNA3Q9UI47 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CTNNA3Q9UI47 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTNNA3Q9UI47 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CTNNA3Q9UI47 RNU1-75P-201ENST00000347264 129 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 RNU6-805P-201ENST00000365643 106 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 MIR490-201ENST00000384865 128 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 RNA5SP31-201ENST00000411144 127 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4□□□□□ -1.77
CTNNA3Q9UI47 AC005019.1-201ENST00000436455 431 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 HMGB1P12-201ENST00000438594 598 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 AC092685.1-201ENST00000447960 1243 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4□□□□□ -1.77
CTNNA3Q9UI47 AL035404.1-201ENST00000497982 568 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CTNNA3Q9UI47 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4□□□□□ -1.77
CTNNA3Q9UI47 MIR2276-201ENST00000516886 89 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 RN7SKP116-201ENST00000516902 319 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4□□□□□ -1.77
CTNNA3Q9UI47 NOP56P3-201ENST00000549457 385 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 SYF2P1-201ENST00000550658 413 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4□□□□□ -1.77
CTNNA3Q9UI47 AC015917.1-201ENST00000579654 510 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 MIR3690-201ENST00000580266 75 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4□□□□□ -1.77
CTNNA3Q9UI47 AC011816.2-201ENST00000607089 556 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4□□□□□ -1.77
CTNNA3Q9UI47 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4□□□□□ -1.77
CTNNA3Q9UI47 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTNNA3Q9UI47 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTNNA3Q9UI47 AC091152.2-201ENST00000591628 2569 ntBASIC4□□□□□ -1.77
CTNNA3Q9UI47 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 RNU1-33P-201ENST00000364249 162 ntBASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 PRRC2CP1-201ENST00000404428 159 ntBASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 VTA1P1-201ENST00000414044 866 ntBASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 HSFY4P-201ENST00000415994 1181 ntBASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 AC012065.2-201ENST00000421295 375 ntBASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 VN1R17P-201ENST00000472048 1090 ntBASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 RPL21P13-201ENST00000488305 481 ntBASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 MTCYBP41-201ENST00000528913 1123 ntBASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 AC010735.1-201ENST00000567305 1026 ntBASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 MTATP6P25-201ENST00000574491 261 ntBASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.99□□□□□ -1.77
CTNNA3Q9UI47 AC006254.3-201ENST00000603353 884 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms