Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD7Q9P2D1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD7Q9P2D1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD7Q9P2D1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHD7Q9P2D1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC2.7□□□□□ -1.98
CHD7Q9P2D1 SNORD62.1-201ENST00000362541 86 ntBASIC2.7□□□□□ -1.98
CHD7Q9P2D1 FABP5P12-201ENST00000515543 389 ntBASIC2.7□□□□□ -1.98
CHD7Q9P2D1 HPRT1P3-201ENST00000539521 576 ntBASIC2.7□□□□□ -1.98
CHD7Q9P2D1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.7□□□□□ -1.98
CHD7Q9P2D1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 Y_RNA.118-201ENST00000363300 101 ntBASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AL121834.1-202ENST00000404494 277 ntBASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AC069218.2-201ENST00000411665 344 ntBASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AC090115.4-201ENST00000609970 188 ntBASIC2.69□□□□□ -1.98
CHD7Q9P2D1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 MTND4P26-201ENST00000415971 1359 ntBASIC2.69□□□□□ -1.98
CHD7Q9P2D1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 Y_RNA.164-201ENST00000363709 102 ntBASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AC011816.1-201ENST00000441346 546 ntBASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AC106872.3-201ENST00000495104 446 ntBASIC2.69□□□□□ -1.98
CHD7Q9P2D1 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AL136981.2-201ENST00000617319 734 ntBASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AC087565.3-202ENST00000642085 1603 ntBASIC2.69□□□□□ -1.98
CHD7Q9P2D1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.69□□□□□ -1.98
CHD7Q9P2D1 SNORA80E-201ENST00000384744 137 ntBASIC2.68□□□□□ -1.98
CHD7Q9P2D1 RPL7P52-201ENST00000449200 742 ntBASIC2.68□□□□□ -1.98
CHD7Q9P2D1 TRBV1-201ENST00000476502 284 ntBASIC2.68□□□□□ -1.98
CHD7Q9P2D1 RPL36AP51-201ENST00000487216 318 ntBASIC2.68□□□□□ -1.98
CHD7Q9P2D1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.68□□□□□ -1.98
CHD7Q9P2D1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.68□□□□□ -1.98
CHD7Q9P2D1 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.68□□□□□ -1.98
CHD7Q9P2D1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.68□□□□□ -1.98
CHD7Q9P2D1 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CHD7Q9P2D1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHD7Q9P2D1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHD7Q9P2D1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHD7Q9P2D1 Y_RNA.595-201ENST00000410403 105 ntBASIC2.68□□□□□ -1.98
CHD7Q9P2D1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.68□□□□□ -1.98
CHD7Q9P2D1 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.68□□□□□ -1.98
CHD7Q9P2D1 AP000942.3-201ENST00000603702 160 ntBASIC2.68□□□□□ -1.98
CHD7Q9P2D1 U4.3-201ENST00000621047 82 ntBASIC2.68□□□□□ -1.98
CHD7Q9P2D1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 MIR7-2-201ENST00000384970 110 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AL353705.4-201ENST00000449661 238 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AP000919.1-202ENST00000581139 1264 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 NF1P10-201ENST00000613227 742 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 RNA5SP274-201ENST00000410484 108 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 RN7SL75P-201ENST00000461926 281 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 RN7SL633P-201ENST00000488974 297 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AC008716.1-201ENST00000511084 513 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AC008277.2-201ENST00000605196 797 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AC010338.1-201ENST00000621823 717 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AC104454.1-201ENST00000421341 1401 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AL024474.1-201ENST00000404655 591 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 NANOGP5-201ENST00000424456 877 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 AC009318.2-201ENST00000610917 651 ntBASIC2.67□□□□□ -1.98
CHD7Q9P2D1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
CHD7Q9P2D1 SAGE4P-201ENST00000442271 3381 ntBASIC2.66□□□□□ -1.98
CHD7Q9P2D1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CHD7Q9P2D1 SNORA64-201ENST00000384674 134 ntBASIC2.66□□□□□ -1.98
CHD7Q9P2D1 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHD7Q9P2D1 RPS26P40-201ENST00000435209 294 ntBASIC2.66□□□□□ -1.98
CHD7Q9P2D1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CHD7Q9P2D1 MAPK10-373ENST00000641983 6772 ntBASIC2.66□□□□□ -1.98
CHD7Q9P2D1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC2.66□□□□□ -1.98
CHD7Q9P2D1 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CHD7Q9P2D1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC2.66□□□□□ -1.98
CHD7Q9P2D1 LINC01355-201ENST00000566551 5444 ntBASIC2.66□□□□□ -1.98
CHD7Q9P2D1 CUL1P1-201ENST00000509510 2425 ntBASIC2.66□□□□□ -1.98
CHD7Q9P2D1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
CHD7Q9P2D1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.66□□□□□ -1.98
CHD7Q9P2D1 AL513043.1-201ENST00000439124 535 ntBASIC2.66□□□□□ -1.98
CHD7Q9P2D1 AP000926.3-201ENST00000497201 299 ntBASIC2.66□□□□□ -1.98
CHD7Q9P2D1 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms