Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ARPC3P2-201ENST00000457786 533 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AP000942.1-201ENST00000463969 747 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC109486.1-201ENST00000486833 374 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC108145.1-201ENST00000503770 153 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC087276.1-201ENST00000529659 480 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC136618.2-201ENST00000575091 400 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC011260.1-201ENST00000578420 472 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC080013.4-201ENST00000607624 649 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 HULC.1-201ENST00000612720 240 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 U6.101-201ENST00000637707 76 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL20A1Q9P218 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 MAPK10-303ENST00000641324 3959 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 IQCB2P-201ENST00000401788 1633 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AL672167.1-206ENST00000356293 943 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 RNA5SP388-201ENST00000362584 119 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 Y_RNA.51-201ENST00000362725 102 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 RNU4-24P-201ENST00000364565 139 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 MIR134-201ENST00000385258 73 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 AL024474.1-201ENST00000404655 591 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 BTBD10P2-201ENST00000404779 676 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 AL512430.2-201ENST00000406786 339 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 TPMTP3-201ENST00000411928 735 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 THAP5P1-201ENST00000439089 262 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 RPL21P89-201ENST00000444021 467 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 AL162151.2-201ENST00000448875 158 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 KATNBL1P6-201ENST00000453433 915 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 MTCO2P18-201ENST00000457151 658 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC026410.2-201ENST00000460281 156 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 RPL23AP2-201ENST00000471227 466 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC116337.2-201ENST00000477662 156 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC006499.5-201ENST00000505037 514 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 OR4A45P-201ENST00000529954 901 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 DYNLL1P4-201ENST00000549314 266 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 PCMTD1P2-201ENST00000565017 355 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 ROCK1P1-201ENST00000573767 549 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC012360.2-201ENST00000609349 391 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 AC122108.2-201ENST00000611946 526 ntBASIC4.76□□□□□ -1.65
COL20A1Q9P218 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL20A1Q9P218 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL20A1Q9P218 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL20A1Q9P218 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
COL20A1Q9P218 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL20A1Q9P218 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL20A1Q9P218 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL20A1Q9P218 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL20A1Q9P218 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL20A1Q9P218 AP000542.2-201ENST00000623199 6179 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL20A1Q9P218 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 OR11H4-201ENST00000315409 1082 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL20A1Q9P218 ENSAP1-201ENST00000392855 326 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 AC025750.1-201ENST00000399891 379 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 EIF5P1-201ENST00000400019 1231 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 AL355379.1-201ENST00000405542 640 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL20A1Q9P218 AC009237.10-201ENST00000414112 510 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 AC008065.1-201ENST00000428525 348 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.75□□□□□ -1.65
COL20A1Q9P218 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.75□□□□□ -1.65
COL20A1Q9P218 AL831737.1-201ENST00000441288 271 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 AL360221.1-201ENST00000445989 335 ntBASIC4.75□□□□□ -1.65
COL20A1Q9P218 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.75□□□□□ -1.65
COL20A1Q9P218 PTMAP3-201ENST00000447474 330 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms