Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL592295.2-201ENST00000612578 206 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC009159.1-201ENST00000618386 642 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 AC136475.10-201ENST00000620253 385 ntBASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCM2LQ9NUG4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC011493.1-201ENST00000596753 1632 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AP001273.1-201ENST00000624493 3152 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 U8.3-201ENST00000363321 132 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 RNU6-761P-201ENST00000384148 107 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 SNORD51-201ENST00000384320 80 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 MRPL42P2-201ENST00000403169 426 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 RPS12P5-201ENST00000423449 371 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 OR2B7P-201ENST00000429302 934 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AL049745.1-201ENST00000433953 286 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 MTND6P18-201ENST00000439477 513 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 MRPL48P1-201ENST00000445390 636 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 RPL29P29-201ENST00000448725 423 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC108751.2-201ENST00000469993 231 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC083982.1-201ENST00000485679 344 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC012170.1-201ENST00000495139 359 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 KCTD9P5-201ENST00000504141 1170 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 COX7A2P2-201ENST00000505291 250 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 NPM1P41-201ENST00000512920 831 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 RNU6-27P-201ENST00000516146 107 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 RNU6-1178P-201ENST00000516674 107 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 MED28P5-201ENST00000528254 438 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 UBE2FP2-201ENST00000566646 462 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 MIR4458-201ENST00000578872 75 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC121334.2-201ENST00000605387 271 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC006329.2-201ENST00000611491 394 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC091304.9-201ENST00000612091 226 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 CR381653.2-201ENST00000624041 768 ntBASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.79□□□□□ -1.64
CCM2LQ9NUG4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC008033.1-201ENST00000216407 1162 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 RNU1-43P-201ENST00000365052 165 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AL049693.1-201ENST00000402760 611 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 RN7SKP235-201ENST00000410662 305 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 RPS27AP12-201ENST00000429552 465 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 UBE2V1P13-201ENST00000436983 439 ntBASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.78□□□□□ -1.64
CCM2LQ9NUG4 CBX1P1-201ENST00000440184 427 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms