Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL645937.1-201ENST00000641739 1652 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 SNORA31-201ENST00000362607 130 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 Y_RNA.110-201ENST00000363220 99 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 RNU6-328P-201ENST00000390887 106 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AC073264.1-201ENST00000411508 416 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 RPS3AP25-201ENST00000411660 793 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 RPS29P4-201ENST00000414733 161 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 UBE2V1P9-201ENST00000414760 368 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AL512661.1-201ENST00000434586 1253 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AC006994.1-201ENST00000438212 839 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 HSFY3P-201ENST00000444242 1191 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 CFTRP1-201ENST00000456646 183 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AL136097.1-201ENST00000456945 913 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AC008379.1-201ENST00000463655 464 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 SNRPGP3-201ENST00000469405 227 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 RN7SL330P-201ENST00000469709 307 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AC008628.1-201ENST00000508663 265 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 RNU6-202P-201ENST00000515998 96 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 IGJP1-201ENST00000522682 475 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 EIF5A2P1-201ENST00000564027 460 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AC023824.3-201ENST00000569003 562 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 U3.45-201ENST00000607547 219 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AL592295.2-201ENST00000612578 206 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AC015967.1-201ENST00000619893 476 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 AL157700.1-201ENST00000561973 1432 ntBASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AP002088.1-201ENST00000382740 395 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 SNORA40.4-201ENST00000390971 128 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 Z99755.1-201ENST00000414048 380 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AC005517.2-201ENST00000424673 553 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 RPL23AP82-202ENST00000427528 469 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 CYCSP43-201ENST00000438233 310 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AC008264.1-201ENST00000447612 367 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AC097262.1-201ENST00000452559 548 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AC010401.1-201ENST00000463867 348 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 RPL23AP67-201ENST00000465341 474 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 RPS4XP6-201ENST00000477670 797 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AL049830.2-201ENST00000480072 201 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 OR5H3P-201ENST00000502817 919 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 IGKV2-26-201ENST00000518305 343 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AP001636.2-201ENST00000525517 696 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 OR5B10P-201ENST00000532869 642 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AC011602.1-201ENST00000546484 331 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 MIR3922-201ENST00000585192 84 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 IGHV3-29-201ENST00000604817 344 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AC106730.3-201ENST00000624568 641 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AC017071.1-201ENST00000564407 2204 ntBASIC3.84□□□□□ -1.79
CCSER1Q9C0I3 AL592494.2-201ENST00000425455 1548 ntBASIC3.84□□□□□ -1.8
CCSER1Q9C0I3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCSER1Q9C0I3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCSER1Q9C0I3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 AC234772.1-201ENST00000377927 937 ntBASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 MIR183-201ENST00000384958 110 ntBASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 AL121972.1-201ENST00000402023 252 ntBASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 SFR1P1-201ENST00000403720 688 ntBASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 RN7SKP285-201ENST00000410137 318 ntBASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 RNA5SP44-201ENST00000410446 133 ntBASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 AC096632.1-201ENST00000427395 310 ntBASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 AC073063.1-201ENST00000434352 607 ntBASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 RPL21P112-201ENST00000434403 463 ntBASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.83□□□□□ -1.8
CCSER1Q9C0I3 MOB1AP2-201ENST00000446060 614 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms