Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 AL590084.1-201ENST00000407885 387 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 RPL31P45-201ENST00000419532 356 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 DPH3P2-201ENST00000422618 250 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 AC011242.1-201ENST00000433596 1158 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 OR4G11P-201ENST00000492842 939 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 RPS6P4-201ENST00000494693 758 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 AC022069.1-201ENST00000582910 658 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 AC023043.2-201ENST00000589678 1026 ntBASIC2.27□□□□□ -2.05
CSMD1Q96PZ7 MIR423-201ENST00000362201 94 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 U3.11-201ENST00000364476 212 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 Y_RNA.295-201ENST00000364918 102 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 Z99127.2-201ENST00000441426 334 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 MTCO1P42-201ENST00000457379 726 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 RN7SKP219-201ENST00000516825 296 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 CACYBPP2-201ENST00000453625 678 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 HMGN1P18-201ENST00000457642 277 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 RN7SL442P-201ENST00000473804 320 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 TRAV11-201ENST00000539512 339 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 Z82209.1-201ENST00000422141 2135 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 MORF4L1P6-201ENST00000418771 268 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 SNRPGP9-201ENST00000456025 225 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 AL359821.1-201ENST00000605519 182 ntBASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CSMD1Q96PZ7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 SNORA70E-201ENST00000384492 135 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 RPL32P35-201ENST00000415214 394 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC096638.1-201ENST00000444678 216 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 CYCSP20-201ENST00000473154 315 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AP000790.1-201ENST00000528891 737 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC093831.2-201ENST00000624393 3427 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 MIR518E-201ENST00000385252 88 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 CYCSP49-201ENST00000420810 319 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC021146.1-201ENST00000511202 716 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AP005136.1-201ENST00000579765 429 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 SNORA46-201ENST00000384762 135 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 Z98742.2-201ENST00000431564 187 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC092013.1-201ENST00000438795 332 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC011816.1-201ENST00000441346 546 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 RPL29P29-201ENST00000448725 423 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AC093673.2-201ENST00000609674 331 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AL158196.1-201ENST00000616786 434 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 AL355493.4-201ENST00000618530 292 ntBASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CSMD1Q96PZ7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC018634.1-201ENST00000437554 401 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC108860.1-201ENST00000484521 383 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 RNA5SP217-201ENST00000515959 91 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AP001317.1-201ENST00000531194 960 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 NRBF2P1-201ENST00000587407 859 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC009318.2-201ENST00000610917 651 ntBASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.24□□□□□ -2.05
CSMD1Q96PZ7 AC104454.1-201ENST00000421341 1401 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms