Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 CALM2P2-201ENST00000428512 440 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 AL445928.1-201ENST00000435545 222 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 AC026826.1-201ENST00000493002 361 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 RNU6-313P-201ENST00000516317 112 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 IGKV2-38-201ENST00000517443 247 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 DUX4L52-201ENST00000549363 777 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 AC022884.2-201ENST00000578535 580 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 MIR4697-201ENST00000582977 78 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 AL118522.2-201ENST00000616045 615 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 uc_338.9-201ENST00000617424 182 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 AL596245.1-201ENST00000618994 362 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LRCH3Q96II8 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 AC022031.1-201ENST00000585985 2593 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 PABPC1P6-201ENST00000445594 1829 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 AL161901.1-201ENST00000624954 3425 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LRCH3Q96II8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LRCH3Q96II8 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LRCH3Q96II8 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LRCH3Q96II8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LRCH3Q96II8 AC023421.1-201ENST00000590535 1785 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 HSPA8P14-201ENST00000552265 1805 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 snoU2_19.2-201ENST00000363024 80 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 Y_RNA.151-201ENST00000363566 112 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 RNU6-393P-201ENST00000384475 107 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 DBIP1-201ENST00000401435 260 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 PRRC2CP1-201ENST00000404428 159 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 MIR1286-201ENST00000408112 78 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 AL645568.3-201ENST00000433683 316 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 OR4C10P-201ENST00000434991 931 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 TRBV26-201ENST00000456572 344 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 RNU7-59P-201ENST00000459101 61 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 AC084198.1-201ENST00000477747 402 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 RN7SL382P-201ENST00000482631 282 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 RN7SL30P-201ENST00000488416 306 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 RNU2-69P-201ENST00000516061 100 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 MIR4643-201ENST00000577473 78 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 PSMA6P4-201ENST00000603247 718 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 RPL12P48-201ENST00000605620 304 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 AC006023.2-201ENST00000609916 167 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 MAPK10-344ENST00000641718 3746 ntBASIC6.79□□□□□ -1.32
LRCH3Q96II8 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LRCH3Q96II8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
LRCH3Q96II8 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC011369.2-201ENST00000624423 1567 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC016583.1-201ENST00000624221 2431 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms