Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PRPF38BQ5VTL8 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AL122126.1-201ENST00000546905 1318 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 RNU6-128P-201ENST00000383976 107 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 RNU6-209P-201ENST00000384118 107 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 Y_RNA.493-201ENST00000384422 102 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 SNORD70.1-201ENST00000391007 85 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AL583834.1-201ENST00000406943 343 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 RPL23AP38-201ENST00000423801 469 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 RPL23AP50-201ENST00000434149 455 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC079922.1-201ENST00000443291 359 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC011753.3-201ENST00000443436 406 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC005008.1-201ENST00000456151 612 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 HMGB3P30-201ENST00000457863 606 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC135721.1-201ENST00000497954 479 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 GAPDHP62-201ENST00000515313 990 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 RNU6-406P-201ENST00000516470 107 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 HMGN1P28-201ENST00000521340 364 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 MIR5692C1-201ENST00000585309 91 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AL138889.2-201ENST00000603883 242 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AL451044.1-201ENST00000604867 238 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 MIR6758-201ENST00000620653 63 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC034229.2-201ENST00000566945 2508 ntBASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
PRPF38BQ5VTL8 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC005839.1-201ENST00000624148 3213 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC126755.2-208ENST00000327792 462 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC138969.1-213ENST00000331436 462 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 RNU6-450P-201ENST00000364654 107 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 RNVU1-6-201ENST00000364688 164 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 RNU6-1109P-201ENST00000391187 107 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AL590139.1-201ENST00000416267 400 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AL356968.1-201ENST00000416622 474 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AL590632.1-201ENST00000424289 371 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 HMGB3P24-201ENST00000433260 622 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 FABP5P13-201ENST00000452144 328 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 FTH1P24-201ENST00000503502 462 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC022493.2-201ENST00000506122 481 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 IGLVIV-53-201ENST00000520107 367 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 MIR4293-201ENST00000584305 78 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC087575.1-201ENST00000585087 229 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC006116.3-201ENST00000592968 361 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC092447.9-201ENST00000603395 144 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC138627.2-201ENST00000624202 601 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 AC104118.1-201ENST00000607625 1589 ntBASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.59□□□□□ -1.35
PRPF38BQ5VTL8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms