Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX4Q33E94 RPS27P23-201ENST00000487608 251 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 NAMPTP2-201ENST00000505629 1115 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.16□□□□□ -1.9
RFX4Q33E94 PRELID3BP5-201ENST00000508612 460 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 AC104108.1-201ENST00000509930 412 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 NPM1P41-201ENST00000512920 831 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 MTCO3P27-201ENST00000514397 196 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 AC007991.1-201ENST00000522680 631 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.16□□□□□ -1.9
RFX4Q33E94 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX4Q33E94 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.16□□□□□ -1.9
RFX4Q33E94 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.16□□□□□ -1.9
RFX4Q33E94 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.16□□□□□ -1.9
RFX4Q33E94 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.16□□□□□ -1.9
RFX4Q33E94 AC010735.1-201ENST00000567305 1026 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 MIR3160-1-201ENST00000577972 85 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 MIR3690-201ENST00000580266 75 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.16□□□□□ -1.9
RFX4Q33E94 AC107982.3-201ENST00000584957 985 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX4Q33E94 AC008687.2-201ENST00000597865 520 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 AC133794.1-201ENST00000602731 914 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 AC120053.1-201ENST00000607706 736 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 AC253576.2-201ENST00000618815 580 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.16□□□□□ -1.9
RFX4Q33E94 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RFX4Q33E94 AC004972.1-201ENST00000623934 2209 ntBASIC3.16□□□□□ -1.9
RFX4Q33E94 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.16□□□□□ -1.9
RFX4Q33E94 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
RFX4Q33E94 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFX4Q33E94 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.16□□□□□ -1.9
RFX4Q33E94 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFX4Q33E94 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
RFX4Q33E94 AC026951.1-201ENST00000559530 2459 ntBASIC3.15□□□□□ -1.9
RFX4Q33E94 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RFX4Q33E94 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RFX4Q33E94 FRG1CP-201ENST00000358464 769 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AP002784.2-201ENST00000397300 549 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX4Q33E94 EI24P1-201ENST00000416584 867 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX4Q33E94 AC012065.2-201ENST00000421295 375 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.15□□□□□ -1.91
RFX4Q33E94 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX4Q33E94 NEK4P1-201ENST00000433383 879 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AL590103.1-201ENST00000434488 307 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX4Q33E94 AC004865.1-201ENST00000442276 1003 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 RAB11AP1-201ENST00000442978 646 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 RPL6P5-201ENST00000445678 828 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.15□□□□□ -1.91
RFX4Q33E94 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RFX4Q33E94 NCOR1P1-202ENST00000486162 291 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AC093278.1-201ENST00000494700 600 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RFX4Q33E94 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX4Q33E94 AC008885.2-201ENST00000509506 930 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AC005351.1-201ENST00000511152 786 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RFX4Q33E94 RNU6-416P-201ENST00000516265 103 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 RN7SKP244-201ENST00000516513 307 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 RN7SKP277-201ENST00000516895 283 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 IGJP1-201ENST00000522682 475 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 IGKV2D-19-201ENST00000523346 262 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.15□□□□□ -1.91
RFX4Q33E94 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RFX4Q33E94 SYF2P1-201ENST00000550658 413 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.15□□□□□ -1.91
RFX4Q33E94 MIR4789-201ENST00000577469 82 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.15□□□□□ -1.91
RFX4Q33E94 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.15□□□□□ -1.91
RFX4Q33E94 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.15□□□□□ -1.91
RFX4Q33E94 VN1R85P-201ENST00000601587 426 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AC006557.5-201ENST00000603126 811 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 HMGN2P28-201ENST00000606102 262 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
RFX4Q33E94 SNORD39.4-201ENST00000620099 78 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RFX4Q33E94 AP000720.1-201ENST00000625091 483 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 ZNF849P-201ENST00000594711 1566 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 AL672296.1-201ENST00000427780 2158 ntBASIC3.15□□□□□ -1.91
RFX4Q33E94 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RFX4Q33E94 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RFX4Q33E94 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RFX4Q33E94 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.91
RFX4Q33E94 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RFX4Q33E94 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
RFX4Q33E94 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFX4Q33E94 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX4Q33E94 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
RFX4Q33E94 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFX4Q33E94 SNORD9-201ENST00000362566 104 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 SNORA7.2-201ENST00000364446 145 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 RNA5SP51-201ENST00000364750 119 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 OR52E6-202ENST00000379946 954 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 RNU6-207P-201ENST00000384137 107 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 MIR591-201ENST00000385290 95 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 RNU6-932P-201ENST00000391108 106 ntBASIC3.14□□□□□ -1.91
RFX4Q33E94 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms