Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.76□□□□□ -1.81
CDH11P55287 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH11P55287 RNY4P37-201ENST00000516225 96 ntBASIC3.76□□□□□ -1.81
CDH11P55287 RN7SKP21-201ENST00000516503 220 ntBASIC3.76□□□□□ -1.81
CDH11P55287 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH11P55287 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.76□□□□□ -1.81
CDH11P55287 AP003730.1-201ENST00000524605 285 ntBASIC3.76□□□□□ -1.81
CDH11P55287 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH11P55287 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH11P55287 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH11P55287 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH11P55287 AC007224.1-201ENST00000564410 144 ntBASIC3.76□□□□□ -1.81
CDH11P55287 AC109446.2-201ENST00000567872 497 ntBASIC3.76□□□□□ -1.81
CDH11P55287 AC007599.1-201ENST00000568688 1174 ntBASIC3.76□□□□□ -1.81
CDH11P55287 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH11P55287 AP005264.7-201ENST00000625003 745 ntBASIC3.76□□□□□ -1.81
CDH11P55287 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH11P55287 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH11P55287 AC007671.2-201ENST00000637344 619 ntBASIC3.76□□□□□ -1.81
CDH11P55287 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH11P55287 AL158163.1-201ENST00000603915 1649 ntBASIC3.76□□□□□ -1.81
CDH11P55287 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CDH11P55287 MARK2P15-201ENST00000432204 2186 ntBASIC3.76□□□□□ -1.81
CDH11P55287 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH11P55287 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH11P55287 AC012321.1-201ENST00000561622 1588 ntBASIC3.76□□□□□ -1.81
CDH11P55287 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.75□□□□□ -1.81
CDH11P55287 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 SNRPEP3-201ENST00000338402 276 ntBASIC3.75□□□□□ -1.81
CDH11P55287 RNU6-1243P-201ENST00000364028 107 ntBASIC3.75□□□□□ -1.81
CDH11P55287 RNU1-132P-201ENST00000364300 164 ntBASIC3.75□□□□□ -1.81
CDH11P55287 RNU4-40P-201ENST00000364351 143 ntBASIC3.75□□□□□ -1.81
CDH11P55287 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CDH11P55287 AL583835.1-201ENST00000399570 407 ntBASIC3.75□□□□□ -1.81
CDH11P55287 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 MIR1183-201ENST00000408856 89 ntBASIC3.75□□□□□ -1.81
CDH11P55287 PGBD4P8-201ENST00000412993 562 ntBASIC3.75□□□□□ -1.81
CDH11P55287 TIMM9P2-201ENST00000419324 266 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AL138785.1-201ENST00000425821 331 ntBASIC3.75□□□□□ -1.81
CDH11P55287 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 AC087650.1-201ENST00000431445 468 ntBASIC3.75□□□□□ -1.81
CDH11P55287 KCTD10P1-201ENST00000434203 625 ntBASIC3.75□□□□□ -1.81
CDH11P55287 RPS25P9-201ENST00000435591 252 ntBASIC3.75□□□□□ -1.81
CDH11P55287 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC087879.1-201ENST00000474343 374 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC013828.1-201ENST00000481845 158 ntBASIC3.75□□□□□ -1.81
CDH11P55287 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.75□□□□□ -1.81
CDH11P55287 AC069499.1-201ENST00000489433 509 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC005726.1-201ENST00000494679 427 ntBASIC3.75□□□□□ -1.81
CDH11P55287 HMGB1P21-201ENST00000502313 581 ntBASIC3.75□□□□□ -1.81
CDH11P55287 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.75□□□□□ -1.81
CDH11P55287 AC109458.1-201ENST00000508858 316 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH11P55287 AC016065.2-201ENST00000514530 444 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.75□□□□□ -1.81
CDH11P55287 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.75□□□□□ -1.81
CDH11P55287 UBE2NP1-201ENST00000545592 458 ntBASIC3.75□□□□□ -1.81
CDH11P55287 ELOCP32-201ENST00000548625 324 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.75□□□□□ -1.81
CDH11P55287 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH11P55287 MIR3160-1-201ENST00000577972 85 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH11P55287 AC104662.1-201ENST00000604448 511 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC072039.2-201ENST00000608883 439 ntBASIC3.75□□□□□ -1.81
CDH11P55287 OR6R2P-201ENST00000609216 300 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC078883.4-201ENST00000623218 367 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC079248.2-201ENST00000623779 326 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AC009039.2-201ENST00000624524 529 ntBASIC3.75□□□□□ -1.81
CDH11P55287 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.75□□□□□ -1.81
CDH11P55287 AL773545.4-201ENST00000637262 310 ntBASIC3.75□□□□□ -1.81
CDH11P55287 AL513478.4-201ENST00000641636 310 ntBASIC3.75□□□□□ -1.81
CDH11P55287 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.75□□□□□ -1.81
CDH11P55287 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
CDH11P55287 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH11P55287 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH11P55287 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH11P55287 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH11P55287 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH11P55287 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
CDH11P55287 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH11P55287 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CDH11P55287 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH11P55287 TAF9BP1-201ENST00000396646 746 ntBASIC3.74□□□□□ -1.81
CDH11P55287 ATP5F1P4-201ENST00000397288 746 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AL022722.2-201ENST00000402519 180 ntBASIC3.74□□□□□ -1.81
CDH11P55287 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.74□□□□□ -1.81
CDH11P55287 NUP35P2-201ENST00000416748 943 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC009518.2-201ENST00000418056 731 ntBASIC3.74□□□□□ -1.81
CDH11P55287 MFSD13B-201ENST00000420133 1290 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AL365203.2-201ENST00000423444 196 ntBASIC3.74□□□□□ -1.81
CDH11P55287 AC093698.1-201ENST00000423843 571 ntBASIC3.74□□□□□ -1.81
CDH11P55287 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms