Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RNA5SP315-201ENST00000516340 116 ntBASIC4.21□□□□□ -1.74
USP8P40818 RNU5A-4P-201ENST00000516588 111 ntBASIC4.21□□□□□ -1.74
USP8P40818 RNA5SP312-201ENST00000517068 116 ntBASIC4.21□□□□□ -1.74
USP8P40818 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.21□□□□□ -1.74
USP8P40818 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.21□□□□□ -1.74
USP8P40818 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP8P40818 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.21□□□□□ -1.74
USP8P40818 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP8P40818 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.21□□□□□ -1.74
USP8P40818 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.21□□□□□ -1.74
USP8P40818 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.21□□□□□ -1.74
USP8P40818 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.21□□□□□ -1.74
USP8P40818 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.21□□□□□ -1.74
USP8P40818 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.21□□□□□ -1.74
USP8P40818 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.21□□□□□ -1.74
USP8P40818 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.21□□□□□ -1.74
USP8P40818 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.21□□□□□ -1.74
USP8P40818 AL590392.1-201ENST00000604960 446 ntBASIC4.21□□□□□ -1.74
USP8P40818 AC083809.1-201ENST00000615051 472 ntBASIC4.21□□□□□ -1.74
USP8P40818 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.21□□□□□ -1.74
USP8P40818 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.21□□□□□ -1.74
USP8P40818 MIR492-201ENST00000638676 116 ntBASIC4.21□□□□□ -1.74
USP8P40818 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP8P40818 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP8P40818 USP8P1-201ENST00000494673 3183 ntBASIC4.21□□□□□ -1.74
USP8P40818 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
USP8P40818 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
USP8P40818 UBE3AP2-201ENST00000429033 2259 ntBASIC4.2□□□□□ -1.74
USP8P40818 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
USP8P40818 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP8P40818 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP8P40818 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
USP8P40818 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP8P40818 AC136624.1-201ENST00000400791 413 ntBASIC4.2□□□□□ -1.74
USP8P40818 GSTA8P-201ENST00000404253 637 ntBASIC4.2□□□□□ -1.74
USP8P40818 RNU2-6P-201ENST00000411404 190 ntBASIC4.2□□□□□ -1.74
USP8P40818 RAB28P1-201ENST00000411517 641 ntBASIC4.2□□□□□ -1.74
USP8P40818 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.2□□□□□ -1.74
USP8P40818 AC009518.2-201ENST00000418056 731 ntBASIC4.2□□□□□ -1.74
USP8P40818 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.2□□□□□ -1.74
USP8P40818 RPL21P110-201ENST00000433345 446 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.2□□□□□ -1.74
USP8P40818 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.2□□□□□ -1.74
USP8P40818 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.2□□□□□ -1.74
USP8P40818 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP8P40818 AC114755.5-201ENST00000447760 831 ntBASIC4.2□□□□□ -1.74
USP8P40818 CFTRP1-201ENST00000456646 183 ntBASIC4.2□□□□□ -1.74
USP8P40818 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
USP8P40818 AC015724.1-201ENST00000478577 156 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC092451.1-201ENST00000480211 153 ntBASIC4.2□□□□□ -1.74
USP8P40818 GAPDHP39-201ENST00000481866 979 ntBASIC4.2□□□□□ -1.74
USP8P40818 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.2□□□□□ -1.74
USP8P40818 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.2□□□□□ -1.74
USP8P40818 DYNLL1P6-201ENST00000503440 264 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC021146.8-201ENST00000507455 733 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC117522.2-201ENST00000510049 657 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC109471.1-201ENST00000511631 612 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC093755.1-201ENST00000512950 1023 ntBASIC4.2□□□□□ -1.74
USP8P40818 MTCO1P35-201ENST00000515270 228 ntBASIC4.2□□□□□ -1.74
USP8P40818 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.2□□□□□ -1.74
USP8P40818 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.2□□□□□ -1.74
USP8P40818 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.2□□□□□ -1.74
USP8P40818 AC087373.1-201ENST00000524920 491 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.2□□□□□ -1.74
USP8P40818 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.2□□□□□ -1.74
USP8P40818 AC010198.2-201ENST00000550612 259 ntBASIC4.2□□□□□ -1.74
USP8P40818 AL132657.2-201ENST00000564417 358 ntBASIC4.2□□□□□ -1.74
USP8P40818 AGGF1P6-201ENST00000569213 976 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.2□□□□□ -1.74
USP8P40818 AC120057.2-201ENST00000571520 271 ntBASIC4.2□□□□□ -1.74
USP8P40818 MIR3912-201ENST00000577566 105 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC022662.1-201ENST00000580252 331 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC115085.1-201ENST00000588924 229 ntBASIC4.2□□□□□ -1.74
USP8P40818 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.2□□□□□ -1.74
USP8P40818 AC008121.2-201ENST00000614647 523 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC018926.3-201ENST00000618841 406 ntBASIC4.2□□□□□ -1.74
USP8P40818 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.2□□□□□ -1.74
USP8P40818 AC026422.1-201ENST00000623961 452 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC007490.1-201ENST00000624321 703 ntBASIC4.2□□□□□ -1.74
USP8P40818 CEP170P1-201ENST00000502249 4587 ntBASIC4.2□□□□□ -1.74
USP8P40818 AC025125.1-201ENST00000624743 1922 ntBASIC4.2□□□□□ -1.74
USP8P40818 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP8P40818 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP8P40818 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.2□□□□□ -1.74
USP8P40818 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.2□□□□□ -1.74
USP8P40818 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.2□□□□□ -1.74
USP8P40818 AC006504.1-201ENST00000562493 3666 ntBASIC4.19□□□□□ -1.74
USP8P40818 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP8P40818 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
USP8P40818 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
USP8P40818 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP8P40818 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.19□□□□□ -1.74
USP8P40818 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP8P40818 MIR16-1-201ENST00000385271 89 ntBASIC4.19□□□□□ -1.74
USP8P40818 RAP1BP1-201ENST00000412709 553 ntBASIC4.19□□□□□ -1.74
USP8P40818 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.19□□□□□ -1.74
USP8P40818 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.19□□□□□ -1.74
USP8P40818 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.19□□□□□ -1.74
USP8P40818 NIPA2P1-201ENST00000426223 976 ntBASIC4.19□□□□□ -1.74
USP8P40818 ARF4P2-201ENST00000430209 526 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms