Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNGA1P29973 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CNGA1P29973 RNU1-64P-201ENST00000365443 163 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 MTND4LP20-201ENST00000402379 270 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 MIR1305-201ENST00000408300 86 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.31□□□□□ -1.56
CNGA1P29973 UBTFL3-201ENST00000418934 1024 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 AC006366.1-201ENST00000422002 759 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.31□□□□□ -1.56
CNGA1P29973 MTCO1P19-201ENST00000443487 500 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 RNU6-956P-201ENST00000458868 103 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.31□□□□□ -1.56
CNGA1P29973 AC104763.1-201ENST00000475274 360 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.31□□□□□ -1.56
CNGA1P29973 AC022447.3-201ENST00000506865 495 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 TMEM248P1-201ENST00000510579 951 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 AC022447.1-201ENST00000515358 464 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.31□□□□□ -1.56
CNGA1P29973 IGKV2D-36-201ENST00000518643 226 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 RFPL1S-203ENST00000539579 330 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
CNGA1P29973 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.31□□□□□ -1.56
CNGA1P29973 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.31□□□□□ -1.56
CNGA1P29973 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.31□□□□□ -1.56
CNGA1P29973 AC093249.4-201ENST00000564755 259 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNGA1P29973 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.31□□□□□ -1.56
CNGA1P29973 MIR4458-201ENST00000578872 75 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 MIR544B-201ENST00000582372 78 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 BBIP1P1-201ENST00000602999 279 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 COX6CP4-201ENST00000605798 228 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 AC090948.1-201ENST00000607464 549 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 AC073968.1-201ENST00000618594 637 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.31□□□□□ -1.56
CNGA1P29973 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNGA1P29973 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNGA1P29973 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.31□□□□□ -1.56
CNGA1P29973 AC092104.1-201ENST00000497346 1441 ntBASIC5.31□□□□□ -1.56
CNGA1P29973 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CNGA1P29973 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNGA1P29973 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.3□□□□□ -1.56
CNGA1P29973 AC006378.2-201ENST00000623178 2476 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 RNA5SP28-201ENST00000363841 119 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 RNU6-339P-201ENST00000384310 107 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 SNORA70C-201ENST00000384538 135 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.3□□□□□ -1.56
CNGA1P29973 AC109780.2-201ENST00000413467 845 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 RPS7P13-201ENST00000413955 498 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 RPL31P45-201ENST00000419532 356 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 RPL7AP25-201ENST00000423357 805 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.3□□□□□ -1.56
CNGA1P29973 AL451139.1-201ENST00000434718 346 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.3□□□□□ -1.56
CNGA1P29973 AL031584.1-201ENST00000447169 754 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 RNA5SP269-201ENST00000459032 137 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 RN7SL303P-201ENST00000469773 251 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.3□□□□□ -1.56
CNGA1P29973 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.3□□□□□ -1.56
CNGA1P29973 CBX3P3-201ENST00000508108 532 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNGA1P29973 MTCO2P32-201ENST00000514865 403 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.3□□□□□ -1.56
CNGA1P29973 CENPUP2-201ENST00000555897 1186 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 AC106785.1-201ENST00000565935 262 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 AC053481.3-201ENST00000577881 843 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.3□□□□□ -1.56
CNGA1P29973 AC115621.1-201ENST00000604653 858 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 BCRP9-201ENST00000605312 388 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 AC010680.4-201ENST00000605334 543 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 AL390208.1-201ENST00000605885 644 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 AL008729.2-201ENST00000606393 473 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 AC012409.3-201ENST00000611343 981 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 AC131238.1-201ENST00000617135 328 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 AC092656.1-203ENST00000624134 423 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 OR14L1P-202ENST00000641545 3009 ntBASIC5.3□□□□□ -1.56
CNGA1P29973 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNGA1P29973 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNGA1P29973 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.3□□□□□ -1.56
CNGA1P29973 AC009951.1-201ENST00000623674 2614 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNGA1P29973 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.29□□□□□ -1.56
CNGA1P29973 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.29□□□□□ -1.56
CNGA1P29973 RNY3P10-201ENST00000384764 102 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 Z98745.1-201ENST00000402553 494 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 PGBD4P8-201ENST00000412993 562 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 RPL17P12-201ENST00000413391 526 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 MTATP6P27-201ENST00000416987 621 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.29□□□□□ -1.56
CNGA1P29973 PSMA6P3-201ENST00000428242 164 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 AL590233.1-201ENST00000430017 456 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.29□□□□□ -1.56
CNGA1P29973 ST13P20-201ENST00000447996 1065 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.29□□□□□ -1.56
CNGA1P29973 AP000797.1-201ENST00000478870 387 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 AC093853.1-201ENST00000515689 483 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 MIR2116-201ENST00000517221 80 ntBASIC5.29□□□□□ -1.56
CNGA1P29973 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.29□□□□□ -1.56
CNGA1P29973 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.29□□□□□ -1.56
CNGA1P29973 OR8L1P-201ENST00000534005 955 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms