Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.8□□□□□ -1.64
POLR2AP24928 MIR6863-201ENST00000636112 90 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.8□□□□□ -1.64
POLR2AP24928 AC073346.2-201ENST00000624724 2058 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 DCAF13P1-201ENST00000495256 1330 ntBASIC4.8□□□□□ -1.64
POLR2AP24928 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
POLR2AP24928 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
POLR2AP24928 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
POLR2AP24928 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
POLR2AP24928 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
POLR2AP24928 RNY3P10-201ENST00000384764 102 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 AL078604.1-201ENST00000404609 466 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.79□□□□□ -1.64
POLR2AP24928 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.79□□□□□ -1.64
POLR2AP24928 USP9YP18-201ENST00000425912 695 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 DNAJC19P4-201ENST00000440115 345 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 AC097499.1-201ENST00000444277 208 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 PAXBP1P1-201ENST00000449315 447 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
POLR2AP24928 PLGLA-201ENST00000465668 449 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.79□□□□□ -1.64
POLR2AP24928 DYNLL1P6-201ENST00000503440 264 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 RNA5SP497-201ENST00000516081 97 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 RNU6-1308P-201ENST00000516817 103 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 AC083923.1-201ENST00000523708 376 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.79□□□□□ -1.64
POLR2AP24928 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.79□□□□□ -1.64
POLR2AP24928 AC244505.7-201ENST00000599675 272 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 AL356055.1-201ENST00000602528 446 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 AL022154.1-201ENST00000604698 785 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 MIR432-201ENST00000606207 94 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 U3.45-201ENST00000607547 219 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 TUG1_1.1-201ENST00000610654 145 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 AL607023.1-201ENST00000620045 248 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.79□□□□□ -1.64
POLR2AP24928 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.79□□□□□ -1.64
POLR2AP24928 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.79□□□□□ -1.64
POLR2AP24928 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
POLR2AP24928 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
POLR2AP24928 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.79□□□□□ -1.64
POLR2AP24928 MAPK10-349ENST00000641767 3661 ntBASIC4.79□□□□□ -1.64
POLR2AP24928 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.79□□□□□ -1.64
POLR2AP24928 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
POLR2AP24928 Y_RNA.408-201ENST00000383987 102 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 RNU6-532P-201ENST00000384318 107 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 RNU2-65P-201ENST00000410162 185 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 AC245054.1-201ENST00000420944 258 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 MRPS36P1-201ENST00000421291 307 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.78□□□□□ -1.64
POLR2AP24928 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.78□□□□□ -1.64
POLR2AP24928 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.78□□□□□ -1.64
POLR2AP24928 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 AC091862.1-201ENST00000438016 1100 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
POLR2AP24928 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.78□□□□□ -1.64
POLR2AP24928 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.78□□□□□ -1.64
POLR2AP24928 RNU6-678P-201ENST00000516832 109 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.78□□□□□ -1.64
POLR2AP24928 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.78□□□□□ -1.64
POLR2AP24928 AC239860.2-201ENST00000525886 270 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.78□□□□□ -1.64
POLR2AP24928 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.78□□□□□ -1.64
POLR2AP24928 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.78□□□□□ -1.64
POLR2AP24928 AP000907.4-201ENST00000604143 237 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 AC234782.5-201ENST00000617723 324 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 AC138649.3-201ENST00000622154 254 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 AL079343.1-201ENST00000572358 1771 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.78□□□□□ -1.64
POLR2AP24928 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 ENSAP3-201ENST00000312710 333 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.78□□□□□ -1.64
POLR2AP24928 MIR921-201ENST00000401133 56 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 RPS15AP38-201ENST00000413110 372 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR2AP24928 UBE2FP3-201ENST00000436366 524 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.78□□□□□ -1.64
POLR2AP24928 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.78□□□□□ -1.64
POLR2AP24928 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.78□□□□□ -1.64
POLR2AP24928 AC146507.1-201ENST00000468335 354 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 RN7SL293P-201ENST00000481765 281 ntBASIC4.78□□□□□ -1.64
POLR2AP24928 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
POLR2AP24928 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.78□□□□□ -1.64
POLR2AP24928 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms