Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
BDNFP23560 AC097714.1-201ENST00000511272 1647 ntBASIC4.36□□□□□ -1.71
BDNFP23560 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
BDNFP23560 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BDNFP23560 RNU5D-1-201ENST00000363299 116 ntBASIC4.36□□□□□ -1.71
BDNFP23560 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
BDNFP23560 RNU6-1122P-201ENST00000384449 107 ntBASIC4.36□□□□□ -1.71
BDNFP23560 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
BDNFP23560 SNORA57.1-201ENST00000391227 145 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AL591034.1-201ENST00000407447 340 ntBASIC4.36□□□□□ -1.71
BDNFP23560 RNU6-628P-201ENST00000410675 107 ntBASIC4.36□□□□□ -1.71
BDNFP23560 VN1R51P-201ENST00000411675 945 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AC092447.6-201ENST00000414578 210 ntBASIC4.36□□□□□ -1.71
BDNFP23560 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.36□□□□□ -1.71
BDNFP23560 RPL21P109-201ENST00000422213 475 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.36□□□□□ -1.71
BDNFP23560 AC012497.1-201ENST00000429392 575 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.36□□□□□ -1.71
BDNFP23560 SNRPEP4-201ENST00000435815 279 ntBASIC4.36□□□□□ -1.71
BDNFP23560 RPL23AP89-201ENST00000439324 255 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.36□□□□□ -1.71
BDNFP23560 SSXP4-201ENST00000451349 245 ntBASIC4.36□□□□□ -1.71
BDNFP23560 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.36□□□□□ -1.71
BDNFP23560 AC007537.2-201ENST00000472093 511 ntBASIC4.36□□□□□ -1.71
BDNFP23560 RPS27AP1-201ENST00000475545 471 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AC104982.1-201ENST00000478775 574 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AL132838.2-201ENST00000492041 314 ntBASIC4.36□□□□□ -1.71
BDNFP23560 RPL21P131-201ENST00000497298 483 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.36□□□□□ -1.71
BDNFP23560 AC093752.1-206ENST00000511823 336 ntBASIC4.36□□□□□ -1.71
BDNFP23560 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BDNFP23560 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.36□□□□□ -1.71
BDNFP23560 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.36□□□□□ -1.71
BDNFP23560 FAM60BP-201ENST00000578364 658 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AL020997.2-201ENST00000602607 184 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AP001330.4-201ENST00000604350 154 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AL031176.1-201ENST00000604554 466 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AF129408.1-201ENST00000608767 431 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AC106028.5-201ENST00000610332 395 ntBASIC4.36□□□□□ -1.71
BDNFP23560 PART1_2.1-201ENST00000612397 250 ntBASIC4.36□□□□□ -1.71
BDNFP23560 CYCSP41-201ENST00000616920 296 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AC120349.2-201ENST00000625002 298 ntBASIC4.36□□□□□ -1.71
BDNFP23560 AC004808.1-201ENST00000627671 721 ntBASIC4.36□□□□□ -1.71
BDNFP23560 CRYM-AS1-204ENST00000637983 556 ntBASIC4.36□□□□□ -1.71
BDNFP23560 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
BDNFP23560 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BDNFP23560 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
BDNFP23560 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
BDNFP23560 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.36□□□□□ -1.71
BDNFP23560 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.36□□□□□ -1.71
BDNFP23560 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
BDNFP23560 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.35□□□□□ -1.71
BDNFP23560 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
BDNFP23560 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.35□□□□□ -1.71
BDNFP23560 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BDNFP23560 AL355143.1-201ENST00000407101 841 ntBASIC4.35□□□□□ -1.71
BDNFP23560 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.35□□□□□ -1.71
BDNFP23560 TPT1P2-201ENST00000413105 503 ntBASIC4.35□□□□□ -1.71
BDNFP23560 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BDNFP23560 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.35□□□□□ -1.71
BDNFP23560 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.35□□□□□ -1.71
BDNFP23560 AC004552.1-201ENST00000419089 348 ntBASIC4.35□□□□□ -1.71
BDNFP23560 HIGD1AP12-201ENST00000427832 281 ntBASIC4.35□□□□□ -1.71
BDNFP23560 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.35□□□□□ -1.71
BDNFP23560 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.35□□□□□ -1.71
BDNFP23560 AC004866.2-201ENST00000438285 481 ntBASIC4.35□□□□□ -1.71
BDNFP23560 MTND2P20-201ENST00000440805 661 ntBASIC4.35□□□□□ -1.71
BDNFP23560 AL589880.1-201ENST00000448271 287 ntBASIC4.35□□□□□ -1.71
BDNFP23560 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.35□□□□□ -1.71
BDNFP23560 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.35□□□□□ -1.71
BDNFP23560 RPL38P1-201ENST00000460914 211 ntBASIC4.35□□□□□ -1.71
BDNFP23560 RPS26P3-201ENST00000470205 348 ntBASIC4.35□□□□□ -1.71
BDNFP23560 RPS15AP17-201ENST00000470598 390 ntBASIC4.35□□□□□ -1.71
BDNFP23560 AC020898.1-201ENST00000474167 787 ntBASIC4.35□□□□□ -1.71
BDNFP23560 AC090543.2-201ENST00000483963 348 ntBASIC4.35□□□□□ -1.71
BDNFP23560 AC004057.1-201ENST00000485827 348 ntBASIC4.35□□□□□ -1.71
BDNFP23560 COX7A2P2-201ENST00000505291 250 ntBASIC4.35□□□□□ -1.71
BDNFP23560 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.35□□□□□ -1.71
BDNFP23560 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.35□□□□□ -1.71
BDNFP23560 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.35□□□□□ -1.71
BDNFP23560 SETP7-201ENST00000552169 453 ntBASIC4.35□□□□□ -1.71
BDNFP23560 HIGD1AP17-201ENST00000554576 276 ntBASIC4.35□□□□□ -1.71
BDNFP23560 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.35□□□□□ -1.71
BDNFP23560 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.35□□□□□ -1.71
BDNFP23560 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.35□□□□□ -1.71
BDNFP23560 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.35□□□□□ -1.71
BDNFP23560 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.35□□□□□ -1.71
BDNFP23560 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.35□□□□□ -1.71
BDNFP23560 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.35□□□□□ -1.71
BDNFP23560 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.35□□□□□ -1.71
BDNFP23560 AC012669.1-201ENST00000603209 283 ntBASIC4.35□□□□□ -1.71
BDNFP23560 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.35□□□□□ -1.71
BDNFP23560 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.35□□□□□ -1.71
BDNFP23560 MIR7154-201ENST00000620673 73 ntBASIC4.35□□□□□ -1.71
BDNFP23560 MIR1322-201ENST00000638013 71 ntBASIC4.35□□□□□ -1.71
BDNFP23560 MTND4P9-201ENST00000507819 1346 ntBASIC4.35□□□□□ -1.71
BDNFP23560 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BDNFP23560 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
BDNFP23560 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BDNFP23560 AL356473.1-201ENST00000406203 1408 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms