Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.03□□□□□ -1.76
LDLRP01130 AC007599.1-201ENST00000568688 1174 ntBASIC4.03□□□□□ -1.76
LDLRP01130 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 MIR3944-201ENST00000581277 108 ntBASIC4.03□□□□□ -1.76
LDLRP01130 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.03□□□□□ -1.76
LDLRP01130 BNIP3P26-201ENST00000600827 554 ntBASIC4.03□□□□□ -1.76
LDLRP01130 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.03□□□□□ -1.76
LDLRP01130 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRP01130 TUSC7.1-201ENST00000610969 165 ntBASIC4.03□□□□□ -1.76
LDLRP01130 MIR6891-201ENST00000618788 93 ntBASIC4.03□□□□□ -1.76
LDLRP01130 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRP01130 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRP01130 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRP01130 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRP01130 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRP01130 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.77
LDLRP01130 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRP01130 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
LDLRP01130 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.02□□□□□ -1.77
LDLRP01130 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRP01130 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
LDLRP01130 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRP01130 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRP01130 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LDLRP01130 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRP01130 XIAPP3-201ENST00000312918 795 ntBASIC4.02□□□□□ -1.77
LDLRP01130 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.02□□□□□ -1.77
LDLRP01130 SNORA71.3-201ENST00000362582 128 ntBASIC4.02□□□□□ -1.77
LDLRP01130 RNU6-492P-201ENST00000363035 104 ntBASIC4.02□□□□□ -1.77
LDLRP01130 RNU6-1214P-201ENST00000363650 109 ntBASIC4.02□□□□□ -1.77
LDLRP01130 RNU6-525P-201ENST00000363685 104 ntBASIC4.02□□□□□ -1.77
LDLRP01130 SNORD46.1-201ENST00000364139 104 ntBASIC4.02□□□□□ -1.77
LDLRP01130 RNU1-132P-201ENST00000364300 164 ntBASIC4.02□□□□□ -1.77
LDLRP01130 MIR3074-201ENST00000384885 81 ntBASIC4.02□□□□□ -1.77
LDLRP01130 MTCO3P31-201ENST00000405526 789 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 AC004022.2-201ENST00000413824 193 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 AC233981.1-201ENST00000423224 461 ntBASIC4.02□□□□□ -1.77
LDLRP01130 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.02□□□□□ -1.77
LDLRP01130 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LDLRP01130 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.02□□□□□ -1.77
LDLRP01130 RFC5P1-201ENST00000454419 874 ntBASIC4.02□□□□□ -1.77
LDLRP01130 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.02□□□□□ -1.77
LDLRP01130 RPL21P71-201ENST00000465598 459 ntBASIC4.02□□□□□ -1.77
LDLRP01130 RPL7P22-201ENST00000466005 733 ntBASIC4.02□□□□□ -1.77
LDLRP01130 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.02□□□□□ -1.77
LDLRP01130 AC010307.1-201ENST00000467206 836 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.02□□□□□ -1.77
LDLRP01130 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.02□□□□□ -1.77
LDLRP01130 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.02□□□□□ -1.77
LDLRP01130 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.02□□□□□ -1.77
LDLRP01130 MTCYBP16-201ENST00000509187 1129 ntBASIC4.02□□□□□ -1.77
LDLRP01130 ATP1B1P1-201ENST00000509767 915 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC110792.2-201ENST00000510278 224 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 IGHV3-32-201ENST00000519182 355 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.02□□□□□ -1.77
LDLRP01130 AP001189.2-201ENST00000527320 189 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.02□□□□□ -1.77
LDLRP01130 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
LDLRP01130 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.02□□□□□ -1.77
LDLRP01130 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AL360157.1-201ENST00000565962 87 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC093519.1-201ENST00000566109 298 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 MIR4286-201ENST00000580651 93 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC067852.4-201ENST00000590314 478 ntBASIC4.02□□□□□ -1.77
LDLRP01130 MRPS35P3-201ENST00000603189 709 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC115621.1-201ENST00000604653 858 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC010680.4-201ENST00000605334 543 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC018638.7-201ENST00000605836 1114 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.02□□□□□ -1.77
LDLRP01130 AL360219.1-201ENST00000610230 366 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC064801.1-201ENST00000612025 407 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AL359535.1-201ENST00000612100 1087 ntBASIC4.02□□□□□ -1.77
LDLRP01130 AC078899.5-201ENST00000612475 178 ntBASIC4.02□□□□□ -1.77
LDLRP01130 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRP01130 AC023158.2-201ENST00000614876 543 ntBASIC4.02□□□□□ -1.77
LDLRP01130 FP325313.1-201ENST00000638228 703 ntBASIC4.02□□□□□ -1.77
LDLRP01130 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRP01130 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
LDLRP01130 EIF2AP4-201ENST00000424793 1781 ntBASIC4.02□□□□□ -1.77
LDLRP01130 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRP01130 NOL8P1-201ENST00000508336 3529 ntBASIC4.01□□□□□ -1.77
LDLRP01130 AC025125.1-201ENST00000624743 1922 ntBASIC4.01□□□□□ -1.77
LDLRP01130 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LDLRP01130 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.01□□□□□ -1.77
LDLRP01130 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.01□□□□□ -1.77
LDLRP01130 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms