Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP4O75379 TIMM9P3-201ENST00000428659 274 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP4O75379 PPIAP13-201ENST00000434706 478 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 AL512326.1-201ENST00000443050 721 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 MTND5P20-201ENST00000448677 143 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP4O75379 RPL37P3-201ENST00000456825 293 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 AC013828.1-201ENST00000481845 158 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 UBA52P3-201ENST00000491303 382 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.73□□□□□ -1.49
VAMP4O75379 AC117522.1-201ENST00000509821 380 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 PTGES3P3-201ENST00000511479 482 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.73□□□□□ -1.49
VAMP4O75379 OR5M7P-201ENST00000526140 972 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.73□□□□□ -1.49
VAMP4O75379 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP4O75379 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 MIR3913-1-201ENST00000577744 102 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 AC006338.1-201ENST00000618453 749 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 AC136475.10-201ENST00000620253 385 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 AC022140.2-201ENST00000623500 188 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 AC006065.6-201ENST00000625201 545 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 FAM157B-203ENST00000639350 358 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 EOGT-210ENST00000615922 1931 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP4O75379 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VAMP4O75379 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP4O75379 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VAMP4O75379 AC126323.6-202ENST00000568092 3511 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP4O75379 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.72□□□□□ -1.49
VAMP4O75379 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VAMP4O75379 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP4O75379 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP4O75379 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
VAMP4O75379 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.72□□□□□ -1.49
VAMP4O75379 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.72□□□□□ -1.49
VAMP4O75379 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP4O75379 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VAMP4O75379 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.72□□□□□ -1.49
VAMP4O75379 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.72□□□□□ -1.49
VAMP4O75379 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.72□□□□□ -1.49
VAMP4O75379 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.72□□□□□ -1.49
VAMP4O75379 HMGB1P31-201ENST00000437242 427 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 PGBD4P3-201ENST00000440731 581 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 UBE2V1P7-201ENST00000446395 340 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 PTMAP3-201ENST00000447474 330 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 Z99127.3-201ENST00000448158 395 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 RPL39P6-201ENST00000448289 150 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 MTND3P10-201ENST00000450967 341 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.72□□□□□ -1.49
VAMP4O75379 RPL7AP52-201ENST00000458096 790 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.72□□□□□ -1.49
VAMP4O75379 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.72□□□□□ -1.49
VAMP4O75379 AC013356.1-201ENST00000489027 564 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.72□□□□□ -1.49
VAMP4O75379 POU5F1P7-201ENST00000508759 541 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 AC093809.1-201ENST00000509155 340 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 NDUFB4P2-201ENST00000509515 391 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 ARL2BPP6-201ENST00000512757 439 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.72□□□□□ -1.49
VAMP4O75379 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.72□□□□□ -1.49
VAMP4O75379 AP004247.1-201ENST00000531556 1289 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.72□□□□□ -1.49
VAMP4O75379 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.72□□□□□ -1.49
VAMP4O75379 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.72□□□□□ -1.49
VAMP4O75379 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.72□□□□□ -1.49
VAMP4O75379 BNIP3P33-201ENST00000598912 569 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.72□□□□□ -1.49
VAMP4O75379 AC140113.4-201ENST00000622087 222 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP4O75379 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.72□□□□□ -1.49
VAMP4O75379 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.72□□□□□ -1.49
VAMP4O75379 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP4O75379 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP4O75379 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP4O75379 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.72□□□□□ -1.49
VAMP4O75379 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.71□□□□□ -1.49
VAMP4O75379 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VAMP4O75379 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VAMP4O75379 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VAMP4O75379 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VAMP4O75379 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VAMP4O75379 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VAMP4O75379 MIR195-201ENST00000385194 87 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 MIR3065-201ENST00000390137 79 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.71□□□□□ -1.5
VAMP4O75379 FAR2P2-201ENST00000413041 594 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 FAR2P4-202ENST00000425399 584 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms