Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC023424.2-201ENST00000493479 777 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AC022447.3-201ENST00000506865 495 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4BO75351 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4BO75351 KCTD9P2-201ENST00000512203 1013 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4BO75351 RN7SKP298-201ENST00000515950 94 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4BO75351 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AC008127.2-201ENST00000549925 1075 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4BO75351 AL049839.1-201ENST00000556151 657 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 ZNF519P3-201ENST00000557158 1032 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AC136619.2-201ENST00000563361 631 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4BO75351 HMGB2P1-201ENST00000591146 634 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AL512782.1-201ENST00000603093 364 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 SEPT7P9-203ENST00000604116 343 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 PRELID3BP8-201ENST00000604148 295 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 MEMO1P5-201ENST00000604810 406 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AC006566.1-201ENST00000608943 513 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AL627230.1-201ENST00000613077 211 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AC025588.4-201ENST00000615802 908 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AL591926.8-201ENST00000616876 211 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4BO75351 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VPS4BO75351 AL451142.2-201ENST00000429076 2090 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS4BO75351 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS4BO75351 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4BO75351 EOGT-210ENST00000615922 1931 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4BO75351 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4BO75351 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS4BO75351 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS4BO75351 AC091046.3-201ENST00000631455 1574 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4BO75351 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS4BO75351 RPL23AP57-201ENST00000332361 466 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC068538.1-201ENST00000376856 336 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 RNU6-952P-201ENST00000391164 108 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AL023807.1-201ENST00000407932 359 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 RNU2-21P-201ENST00000410368 188 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS4BO75351 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS4BO75351 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS4BO75351 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS4BO75351 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS4BO75351 AC234779.1-201ENST00000425910 285 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS4BO75351 AL356583.2-201ENST00000426536 280 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS4BO75351 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS4BO75351 AC091862.1-201ENST00000438016 1100 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 LSM1P1-201ENST00000438629 273 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS4BO75351 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS4BO75351 AC239809.1-201ENST00000450470 217 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 RPL7P22-201ENST00000466005 733 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC087879.1-201ENST00000474343 374 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC108022.1-201ENST00000493466 478 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC106872.3-201ENST00000495104 446 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 RPS4XP18-201ENST00000495480 763 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC090453.1-201ENST00000495560 436 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS4BO75351 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS4BO75351 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS4BO75351 LSM6P2-201ENST00000552208 177 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 FKBP1BP1-201ENST00000553366 325 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS4BO75351 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS4BO75351 BNIP3P5-201ENST00000562290 498 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AL133457.1-201ENST00000564251 987 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4BO75351 AP001180.3-201ENST00000582221 145 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS4BO75351 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.63□□□□□ -1.67
VPS4BO75351 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.63□□□□□ -1.67
VPS4BO75351 AL391358.1-201ENST00000605342 190 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC010857.1-201ENST00000606398 594 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC103710.4-201ENST00000609301 899 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS4BO75351 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 MIR7703-201ENST00000620784 77 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS4BO75351 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4BO75351 AC108751.5-201ENST00000492880 1336 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS4BO75351 MFSD8-216ENST00000641147 4009 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4BO75351 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4BO75351 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VPS4BO75351 AP001273.1-201ENST00000624493 3152 ntBASIC4.63□□□□□ -1.67
VPS4BO75351 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS4BO75351 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VPS4BO75351 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 AL031119.1-201ENST00000404707 1879 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms