Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.99□□□□□ -1.93
SGCEO43556 AC002456.2-201ENST00000509356 380 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC008885.2-201ENST00000509506 930 ntBASIC2.99□□□□□ -1.93
SGCEO43556 HMGN1P15-201ENST00000513870 295 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.99□□□□□ -1.93
SGCEO43556 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.99□□□□□ -1.93
SGCEO43556 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.99□□□□□ -1.93
SGCEO43556 OR5AK3P-201ENST00000527486 1297 ntBASIC2.99□□□□□ -1.93
SGCEO43556 OR8I1P-201ENST00000529291 931 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC004024.1-201ENST00000549244 247 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.99□□□□□ -1.93
SGCEO43556 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.99□□□□□ -1.93
SGCEO43556 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
SGCEO43556 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.99□□□□□ -1.93
SGCEO43556 AC006963.1-201ENST00000624003 1052 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC020923.1-201ENST00000624021 917 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC034229.5-201ENST00000624258 185 ntBASIC2.99□□□□□ -1.93
SGCEO43556 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.99□□□□□ -1.93
SGCEO43556 AC012442.3-202ENST00000636742 206 ntBASIC2.99□□□□□ -1.93
SGCEO43556 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SGCEO43556 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
SGCEO43556 AC004925.1-201ENST00000624256 2706 ntBASIC2.99□□□□□ -1.93
SGCEO43556 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.99□□□□□ -1.93
SGCEO43556 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.99□□□□□ -1.93
SGCEO43556 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.99□□□□□ -1.93
SGCEO43556 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.99□□□□□ -1.93
SGCEO43556 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SGCEO43556 MTND4P8-201ENST00000514997 1362 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC017071.1-201ENST00000564407 2204 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC008264.2-201ENST00000610193 3731 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AC107081.3-201ENST00000612715 2034 ntBASIC2.98□□□□□ -1.93
SGCEO43556 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SGCEO43556 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.98□□□□□ -1.93
SGCEO43556 MIR30E-201ENST00000362104 92 ntBASIC2.98□□□□□ -1.93
SGCEO43556 SNORA62.3-201ENST00000365110 153 ntBASIC2.98□□□□□ -1.93
SGCEO43556 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SGCEO43556 DEFB109C-201ENST00000382575 264 ntBASIC2.98□□□□□ -1.93
SGCEO43556 DEFB109B-201ENST00000382656 264 ntBASIC2.98□□□□□ -1.93
SGCEO43556 MIR134-201ENST00000385258 73 ntBASIC2.98□□□□□ -1.93
SGCEO43556 PTMAP2-201ENST00000397627 327 ntBASIC2.98□□□□□ -1.93
SGCEO43556 RN7SKP111-201ENST00000410349 271 ntBASIC2.98□□□□□ -1.93
SGCEO43556 HMGB3P23-201ENST00000414981 585 ntBASIC2.98□□□□□ -1.93
SGCEO43556 BX842559.1-201ENST00000419615 532 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.98□□□□□ -1.93
SGCEO43556 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.98□□□□□ -1.93
SGCEO43556 BX890604.2-201ENST00000427883 474 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.98□□□□□ -1.93
SGCEO43556 RPL23AP15-201ENST00000450202 459 ntBASIC2.98□□□□□ -1.93
SGCEO43556 RPS24P6-201ENST00000452670 400 ntBASIC2.98□□□□□ -1.93
SGCEO43556 RBMY2UP-201ENST00000453474 324 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.98□□□□□ -1.93
SGCEO43556 OR9N1P-202ENST00000494289 481 ntBASIC2.98□□□□□ -1.93
SGCEO43556 OR52A4P-203ENST00000498233 1014 ntBASIC2.98□□□□□ -1.93
SGCEO43556 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.98□□□□□ -1.93
SGCEO43556 RNF138P1-201ENST00000502765 546 ntBASIC2.98□□□□□ -1.93
SGCEO43556 HMGB1P22-201ENST00000505315 124 ntBASIC2.98□□□□□ -1.93
SGCEO43556 FCF1P8-201ENST00000510322 597 ntBASIC2.98□□□□□ -1.93
SGCEO43556 FABP5P12-201ENST00000515543 389 ntBASIC2.98□□□□□ -1.93
SGCEO43556 RNA5SP468-201ENST00000516782 93 ntBASIC2.98□□□□□ -1.93
SGCEO43556 RN7SKP116-201ENST00000516902 319 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.98□□□□□ -1.93
SGCEO43556 OR5B10P-201ENST00000532869 642 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SGCEO43556 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.98□□□□□ -1.93
SGCEO43556 AC034268.2-201ENST00000571784 482 ntBASIC2.98□□□□□ -1.93
SGCEO43556 MTCO3P24-201ENST00000572729 782 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AL109653.1-201ENST00000603091 248 ntBASIC2.98□□□□□ -1.93
SGCEO43556 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AC015849.2-201ENST00000605738 409 ntBASIC2.98□□□□□ -1.93
SGCEO43556 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.98□□□□□ -1.93
SGCEO43556 CR589904.2-201ENST00000612533 440 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AL390240.1-201ENST00000612950 384 ntBASIC2.98□□□□□ -1.93
SGCEO43556 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AC244258.1-201ENST00000637553 1071 ntBASIC2.98□□□□□ -1.93
SGCEO43556 AC010733.2-201ENST00000589496 5702 ntBASIC2.98□□□□□ -1.93
SGCEO43556 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
SGCEO43556 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.98□□□□□ -1.93
SGCEO43556 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SGCEO43556 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SGCEO43556 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SGCEO43556 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.97□□□□□ -1.93
SGCEO43556 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.97□□□□□ -1.93
SGCEO43556 AL359893.1-201ENST00000447628 1580 ntBASIC2.97□□□□□ -1.93
SGCEO43556 RNU4-35P-201ENST00000362588 141 ntBASIC2.97□□□□□ -1.93
SGCEO43556 RNA5SP383-201ENST00000362934 120 ntBASIC2.97□□□□□ -1.93
SGCEO43556 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.97□□□□□ -1.93
SGCEO43556 RNU6-629P-201ENST00000384061 103 ntBASIC2.97□□□□□ -1.93
SGCEO43556 MIR200C-201ENST00000384980 68 ntBASIC2.97□□□□□ -1.93
SGCEO43556 SNORD17-201ENST00000390930 237 ntBASIC2.97□□□□□ -1.93
SGCEO43556 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SGCEO43556 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SGCEO43556 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.97□□□□□ -1.93
SGCEO43556 AL589655.1-201ENST00000405398 482 ntBASIC2.97□□□□□ -1.93
SGCEO43556 AL031121.1-201ENST00000406553 254 ntBASIC2.97□□□□□ -1.93
SGCEO43556 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.97□□□□□ -1.93
SGCEO43556 AL356968.1-201ENST00000416622 474 ntBASIC2.97□□□□□ -1.93
SGCEO43556 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.97□□□□□ -1.93
SGCEO43556 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.97□□□□□ -1.93
SGCEO43556 AC093151.1-201ENST00000427711 313 ntBASIC2.97□□□□□ -1.93
SGCEO43556 UBE2V2P3-201ENST00000433562 437 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms