Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PROM1O43490 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
PROM1O43490 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
PROM1O43490 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.59□□□□□ -1.68
PROM1O43490 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PROM1O43490 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PROM1O43490 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PROM1O43490 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
PROM1O43490 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PROM1O43490 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.58□□□□□ -1.68
PROM1O43490 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.58□□□□□ -1.68
PROM1O43490 RNVU1-6-201ENST00000364688 164 ntBASIC4.58□□□□□ -1.68
PROM1O43490 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PROM1O43490 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PROM1O43490 RPS4XP9-201ENST00000405151 780 ntBASIC4.58□□□□□ -1.68
PROM1O43490 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.58□□□□□ -1.68
PROM1O43490 RNU6-248P-201ENST00000410720 107 ntBASIC4.58□□□□□ -1.68
PROM1O43490 PRELID3BP11-201ENST00000414230 479 ntBASIC4.58□□□□□ -1.68
PROM1O43490 CCDC58P2-201ENST00000417131 366 ntBASIC4.58□□□□□ -1.68
PROM1O43490 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.58□□□□□ -1.68
PROM1O43490 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.58□□□□□ -1.68
PROM1O43490 OR2AM1P-201ENST00000422137 422 ntBASIC4.58□□□□□ -1.68
PROM1O43490 RGS17P1-201ENST00000423358 553 ntBASIC4.58□□□□□ -1.68
PROM1O43490 EIF4HP2-201ENST00000424380 563 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.58□□□□□ -1.68
PROM1O43490 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.58□□□□□ -1.68
PROM1O43490 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.58□□□□□ -1.68
PROM1O43490 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.58□□□□□ -1.68
PROM1O43490 AL451139.1-201ENST00000434718 346 ntBASIC4.58□□□□□ -1.68
PROM1O43490 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PROM1O43490 Z99127.3-201ENST00000448158 395 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.58□□□□□ -1.68
PROM1O43490 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.58□□□□□ -1.68
PROM1O43490 AC092989.1-201ENST00000481235 277 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AC020890.1-201ENST00000491837 504 ntBASIC4.58□□□□□ -1.68
PROM1O43490 HMGB1P21-201ENST00000502313 581 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.58□□□□□ -1.68
PROM1O43490 BTF3P13-201ENST00000513224 490 ntBASIC4.58□□□□□ -1.68
PROM1O43490 RNU6-488P-201ENST00000515918 99 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.58□□□□□ -1.68
PROM1O43490 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.58□□□□□ -1.68
PROM1O43490 ARL2BPP5-201ENST00000523141 481 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AP004247.1-201ENST00000531556 1289 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.58□□□□□ -1.68
PROM1O43490 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.58□□□□□ -1.68
PROM1O43490 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.58□□□□□ -1.68
PROM1O43490 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.58□□□□□ -1.68
PROM1O43490 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.58□□□□□ -1.68
PROM1O43490 SLC25A36P1-201ENST00000590111 465 ntBASIC4.58□□□□□ -1.68
PROM1O43490 VN1R79P-201ENST00000593540 513 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AC233280.2-201ENST00000603917 1070 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AC112187.2-201ENST00000604345 283 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AC115621.1-201ENST00000604653 858 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AC091304.9-201ENST00000612091 226 ntBASIC4.58□□□□□ -1.68
PROM1O43490 AC108479.2-201ENST00000617314 601 ntBASIC4.58□□□□□ -1.68
PROM1O43490 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PROM1O43490 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PROM1O43490 IRF5P1-201ENST00000504852 2164 ntBASIC4.58□□□□□ -1.68
PROM1O43490 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.58□□□□□ -1.68
PROM1O43490 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.58□□□□□ -1.68
PROM1O43490 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.58□□□□□ -1.68
PROM1O43490 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PROM1O43490 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.57□□□□□ -1.68
PROM1O43490 OR4G11P-202ENST00000642116 1414 ntBASIC4.57□□□□□ -1.68
PROM1O43490 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PROM1O43490 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PROM1O43490 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PROM1O43490 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PROM1O43490 RNU6-444P-201ENST00000383988 108 ntBASIC4.57□□□□□ -1.68
PROM1O43490 RNA5SP87-201ENST00000384155 118 ntBASIC4.57□□□□□ -1.68
PROM1O43490 RNU6-809P-201ENST00000384461 107 ntBASIC4.57□□□□□ -1.68
PROM1O43490 RPS3AP36-201ENST00000398190 775 ntBASIC4.57□□□□□ -1.68
PROM1O43490 HSPD1P16-201ENST00000402302 394 ntBASIC4.57□□□□□ -1.68
PROM1O43490 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.57□□□□□ -1.68
PROM1O43490 AC114755.2-201ENST00000413520 361 ntBASIC4.57□□□□□ -1.68
PROM1O43490 COX6B1P1-201ENST00000415962 213 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AL590139.1-201ENST00000416267 400 ntBASIC4.57□□□□□ -1.68
PROM1O43490 COX6CP17-201ENST00000421389 185 ntBASIC4.57□□□□□ -1.68
PROM1O43490 C4BPAP2-201ENST00000428434 478 ntBASIC4.57□□□□□ -1.68
PROM1O43490 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.57□□□□□ -1.68
PROM1O43490 RPS17P8-201ENST00000434525 335 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.57□□□□□ -1.68
PROM1O43490 LSM1P1-201ENST00000438629 273 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AC073614.1-201ENST00000438690 650 ntBASIC4.57□□□□□ -1.68
PROM1O43490 MTATP6P30-201ENST00000443540 664 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AC073587.1-201ENST00000447093 876 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.57□□□□□ -1.68
PROM1O43490 MTCO1P48-201ENST00000448024 1096 ntBASIC4.57□□□□□ -1.68
PROM1O43490 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.57□□□□□ -1.68
PROM1O43490 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.57□□□□□ -1.68
PROM1O43490 RN7SL459P-201ENST00000481078 302 ntBASIC4.57□□□□□ -1.68
PROM1O43490 FAM172BP-201ENST00000487497 1089 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AC008897.1-201ENST00000494006 347 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AC114981.1-201ENST00000503897 678 ntBASIC4.57□□□□□ -1.68
PROM1O43490 SNORA18.6-201ENST00000516792 115 ntBASIC4.57□□□□□ -1.68
PROM1O43490 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.57□□□□□ -1.68
PROM1O43490 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PROM1O43490 AC022882.1-201ENST00000532142 501 ntBASIC4.57□□□□□ -1.68
PROM1O43490 AC068587.4-201ENST00000533893 186 ntBASIC4.57□□□□□ -1.68
PROM1O43490 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms