Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 LARP7P3-201ENST00000579888 337 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 MIR2682-201ENST00000580305 110 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 UBL5P2-201ENST00000583788 219 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 MIMT1-201ENST00000597105 1050 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC006539.2-201ENST00000601729 572 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AP003117.2-201ENST00000606010 545 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 PLCE1P1-201ENST00000622094 305 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RPL23AP61-201ENST00000623642 466 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC006386.2-201ENST00000624491 75 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC012005.1-201ENST00000624575 75 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC118273.1-201ENST00000525324 3006 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC025125.1-201ENST00000624743 1922 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC000403.1-201ENST00000613696 3585 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RNU6-1251P-201ENST00000364502 107 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 SNORA71.1-201ENST00000364523 117 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 HMGB1P13-201ENST00000406019 642 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 PRELID3BP11-201ENST00000414230 479 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RPL35AP12-201ENST00000425362 338 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AL353705.1-201ENST00000433468 480 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RSL24D1P3-201ENST00000449255 495 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC089999.1-201ENST00000460336 374 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AP001486.1-201ENST00000463339 476 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 PTGES3P3-201ENST00000511479 482 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 PRELID3BP8-201ENST00000604148 295 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC048347.1-201ENST00000624621 427 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC096656.1-201ENST00000623826 1364 ntBASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.45□□□□□ -2.02
TCRBV4S1A1TA0A5B7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RNF6P1-201ENST00000444889 1784 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 SNORA7.4-201ENST00000384249 137 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 CCNB2P1-201ENST00000399411 1150 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC110754.1-201ENST00000399740 601 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RPL5P18-201ENST00000406671 891 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RNA5SP344-201ENST00000411081 104 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC007563.3-201ENST00000433233 371 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC108734.1-201ENST00000439549 399 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC069540.1-201ENST00000446320 988 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 SLC31A1P1-201ENST00000451221 567 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC011825.1-201ENST00000484967 388 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 MTATP6P22-201ENST00000507369 598 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RNU1-103P-201ENST00000516502 125 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 PSMA2P1-201ENST00000526365 646 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AP000889.1-201ENST00000530968 660 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 NF1P5-201ENST00000588287 448 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 CR392039.4-201ENST00000624968 501 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AL137790.1-201ENST00000634283 177 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC084035.1-201ENST00000634543 607 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 MIR622-201ENST00000638396 96 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC119674.1-212ENST00000641155 993 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC007256.1-201ENST00000392253 2765 ntBASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TCRBV4S1A1TA0A5B7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.43□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AL353743.4-201ENST00000422653 1547 ntBASIC2.43□□□□□ -2.02
TCRBV4S1A1TA0A5B7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
TCRBV4S1A1TA0A5B7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TCRBV4S1A1TA0A5B7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TCRBV4S1A1TA0A5B7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.43□□□□□ -2.02
TCRBV4S1A1TA0A5B7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms