Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 U3.4-201ENST00000363352 213 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 RNU1-132P-201ENST00000364300 164 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 RPS24P12-201ENST00000402084 394 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL133270.1-201ENST00000402635 279 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 SNORA3C-201ENST00000408792 125 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC069218.2-201ENST00000411665 344 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 PGBD4P8-201ENST00000412993 562 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC073136.2-201ENST00000417282 849 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 CYCSP46-201ENST00000423569 204 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 COX6CP15-201ENST00000426313 211 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 LARP1BP3-201ENST00000437229 869 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 EEF1E1P1-201ENST00000446998 430 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 ARPC3P5-201ENST00000448802 534 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 HMGB3P22-202ENST00000451823 572 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 RPL23AP24-201ENST00000458203 385 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC026410.2-201ENST00000460281 156 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 RPS26P15-201ENST00000488067 348 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC013356.1-201ENST00000489027 564 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 HMGB1P21-201ENST00000502313 581 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL592156.1-201ENST00000508758 304 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 RN7SKP82-201ENST00000516786 223 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 IGKV2-38-201ENST00000517443 247 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC008127.2-201ENST00000549925 1075 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 PCMTD1P2-201ENST00000565017 355 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AP001004.1-201ENST00000582468 324 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL451086.1-201ENST00000605596 223 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 FAM27D1-201ENST00000612308 341 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL122125.1-201ENST00000616999 600 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC233309.1-201ENST00000619522 751 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL356266.1-201ENST00000623311 483 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AL356596.1-201ENST00000624230 379 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 U6.101-201ENST00000637707 76 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 AC130650.2-201ENST00000618736 2403 ntBASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.22□□□□□ -1.73
TCRBV7S3A2A0A539 CR383658.2-201ENST00000547576 1525 ntBASIC4.21□□□□□ -1.73
TCRBV7S3A2A0A539 AC139713.2-214ENST00000642059 1811 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC011155.1-201ENST00000316512 456 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 RNU4-91P-201ENST00000364778 135 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 Y_RNA.553-201ENST00000384670 102 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC007066.1-201ENST00000392902 381 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 OR8G2P-201ENST00000412796 908 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 TMX2P1-201ENST00000436507 708 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC104073.1-201ENST00000451988 151 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 HMGB3P21-201ENST00000452483 547 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AL445669.2-201ENST00000454425 421 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC041039.1-201ENST00000485656 536 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC068724.1-201ENST00000487100 792 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 RPL35P6-201ENST00000490024 372 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 RPL31P61-201ENST00000496160 376 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC231760.1-201ENST00000498002 260 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC060788.1-201ENST00000521318 469 ntBASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.21□□□□□ -1.74
TCRBV7S3A2A0A539 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms