Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 RNA5SP42-201ENST00000364278 115 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 SNORD17-201ENST00000390930 237 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 PRRC2CP1-201ENST00000404428 159 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 LIPT1P1-201ENST00000415870 1186 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 HSFY4P-201ENST00000415994 1181 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AL513174.1-201ENST00000423182 629 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AC097713.2-201ENST00000430199 356 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 SKP1P1-201ENST00000438081 489 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 SSXP4-201ENST00000451349 245 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 ARPC3P2-201ENST00000457786 533 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AP002884.2-201ENST00000471647 395 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AC093663.2-201ENST00000484625 313 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AC109635.4-202ENST00000531666 412 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 SERPINE4P-201ENST00000554978 281 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 MIR5186-201ENST00000577504 120 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AL009028.1-201ENST00000604895 802 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 HPVC1-201ENST00000629899 1198 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 OR6C71P-202ENST00000641886 1107 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 AL163152.1-201ENST00000642001 374 ntBASIC3.3□□□□□ -1.88
CTSFQ9UBX1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.3□□□□□ -1.88
CTSFQ9UBX1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AF117829.1-206ENST00000621883 3802 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 RNU1-33P-201ENST00000364249 162 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC234772.1-201ENST00000377927 937 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 RNU6-761P-201ENST00000384148 107 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 RNU6-1005P-201ENST00000384519 107 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 SNORA48.8-201ENST00000391324 134 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 UBE2V1P15-201ENST00000407776 448 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 SNORA11.1-201ENST00000408133 129 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 U3.39-201ENST00000408569 239 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 MIR1303-201ENST00000408625 86 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 MTND4P22-201ENST00000413116 1169 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 HMGB3P23-201ENST00000414981 585 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 FAR1P1-201ENST00000427163 934 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 UBE2V1P1-201ENST00000430836 445 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 MRPS18BP2-201ENST00000434310 759 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC069540.1-201ENST00000446320 988 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC084357.1-201ENST00000473404 255 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 SYPL1P1-201ENST00000473622 768 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 NPM1P17-201ENST00000479221 602 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 SETP14-201ENST00000497538 873 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 HSPD1P15-201ENST00000505573 1122 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 ARL2BPP6-201ENST00000512757 439 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC103833.1-201ENST00000517442 172 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AF279873.1-201ENST00000523393 313 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AP004371.1-201ENST00000525240 214 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AL365400.2-201ENST00000605604 902 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC016877.3-201ENST00000606778 504 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AL590282.1-201ENST00000610379 1136 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AC096577.2-201ENST00000611455 153 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 AP006248.3-201ENST00000623580 594 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.29□□□□□ -1.88
CTSFQ9UBX1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CTSFQ9UBX1 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTSFQ9UBX1 ZNF37BP-203ENST00000452306 1352 ntBASIC3.28□□□□□ -1.88
CTSFQ9UBX1 AL049781.1-201ENST00000623195 3585 ntBASIC3.28□□□□□ -1.88
CTSFQ9UBX1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.28□□□□□ -1.88
CTSFQ9UBX1 AL645937.1-201ENST00000641739 1652 ntBASIC3.28□□□□□ -1.88
CTSFQ9UBX1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.28□□□□□ -1.88
CTSFQ9UBX1 AC110774.1-201ENST00000623567 2018 ntBASIC3.28□□□□□ -1.88
CTSFQ9UBX1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTSFQ9UBX1 RNU6-283P-201ENST00000364788 107 ntBASIC3.28□□□□□ -1.88
CTSFQ9UBX1 RNA5SP129-201ENST00000410276 118 ntBASIC3.28□□□□□ -1.88
CTSFQ9UBX1 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.28□□□□□ -1.88
CTSFQ9UBX1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.28□□□□□ -1.88
CTSFQ9UBX1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTSFQ9UBX1 RPS29P31-201ENST00000446147 164 ntBASIC3.28□□□□□ -1.88
CTSFQ9UBX1 AC104978.1-201ENST00000449387 391 ntBASIC3.28□□□□□ -1.88
CTSFQ9UBX1 RPL21P10-201ENST00000463521 490 ntBASIC3.28□□□□□ -1.88
CTSFQ9UBX1 RN7SL594P-201ENST00000470590 287 ntBASIC3.28□□□□□ -1.88
CTSFQ9UBX1 AC023598.1-201ENST00000472521 361 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms