Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RN7SL863P-201ENST00000462370 296 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 RPL23AP62-201ENST00000463396 453 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 RPS29P2-201ENST00000479278 136 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 RPL7P47-201ENST00000497299 556 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 RNU6-1102P-201ENST00000516149 96 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 MIR2276-201ENST00000516886 89 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC079148.1-201ENST00000565944 819 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC090079.2-201ENST00000575289 768 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 PCNAP1-202ENST00000595299 752 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 uc_338.1-201ENST00000612113 180 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC243756.2-201ENST00000618406 463 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC080188.3-201ENST00000624842 748 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 SEPT7P7-201ENST00000420492 1301 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 SNORA48.5-201ENST00000391143 135 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 HMGB1P10-201ENST00000395823 563 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 HMGB1P13-201ENST00000406019 642 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AC004022.2-201ENST00000413824 193 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 LIPT1P1-201ENST00000415870 1186 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AL121882.1-201ENST00000422893 417 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 RPL23AP23-201ENST00000452590 471 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 RNU7-170P-201ENST00000459303 61 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AC020893.1-201ENST00000502452 580 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 MTATP6P22-201ENST00000507369 598 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 RNU2-58P-201ENST00000516403 183 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 MIR2682-201ENST00000580305 110 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AC079610.2-201ENST00000604818 690 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AL158211.2-201ENST00000607282 395 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AC084824.5-201ENST00000612009 413 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AC097460.3-201ENST00000623099 442 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AC000367.1-201ENST00000452711 1766 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 AL353743.1-202ENST00000431724 1695 ntBASIC3.52□□□□□ -1.85
NXF3Q9H4D5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NXF3Q9H4D5 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 PWAR6-201ENST00000552334 4618 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 RNU6-609P-201ENST00000365459 107 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 RNU6-328P-201ENST00000390887 106 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 PTGES3P2-201ENST00000407942 482 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AC009237.5-201ENST00000414271 501 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AC234782.4-201ENST00000417646 1048 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AC012065.2-201ENST00000421295 375 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AC012497.1-201ENST00000429392 575 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AL353705.1-201ENST00000433468 480 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AP001992.1-205ENST00000462248 379 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 SNRPGP3-201ENST00000469405 227 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AC078857.1-201ENST00000469870 667 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 PCBP2P3-201ENST00000509726 843 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 HAUS1P3-201ENST00000523909 662 ntBASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.51□□□□□ -1.85
NXF3Q9H4D5 AP004242.1-201ENST00000533701 349 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms