Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AL589743.1-201ENST00000551932 2712 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC024651.2-201ENST00000562480 2098 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AL359715.3-201ENST00000569267 2123 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 KARSP1-201ENST00000451871 1752 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU1-134P-201ENST00000362935 165 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.82-201ENST00000363000 102 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.92-201ENST00000363043 102 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.220-201ENST00000364244 109 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.235-201ENST00000364412 102 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.306-201ENST00000365015 102 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.308-201ENST00000365043 101 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.312-201ENST00000365089 102 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.322-201ENST00000365151 102 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-728P-201ENST00000365375 104 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.357-201ENST00000365487 109 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-787P-201ENST00000384032 107 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-106P-201ENST00000384405 107 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.581-201ENST00000391017 97 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RPL23AP32-201ENST00000395315 459 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 MIR541-201ENST00000401360 84 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 DNAJC19P6-201ENST00000401853 280 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-554P-201ENST00000410466 106 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RN7SKP159-201ENST00000410657 292 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SLC35E1P1-201ENST00000419313 864 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RPL7AP14-201ENST00000424041 802 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 MTCO1P5-201ENST00000433573 344 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SEPT7P5-201ENST00000434048 306 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SEPT7P4-201ENST00000437076 306 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC005154.2-201ENST00000438110 379 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AL391987.1-201ENST00000441025 200 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AL450996.1-201ENST00000445574 1202 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RPL36AP39-201ENST00000445859 318 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC103563.5-201ENST00000455643 364 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.650-201ENST00000459002 102 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC094085.1-201ENST00000468914 584 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RN7SL643P-201ENST00000471845 291 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RPL23AP11-201ENST00000475260 469 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 MTND6P8-201ENST00000503471 522 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC139272.1-201ENST00000505516 640 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC025458.1-201ENST00000506046 166 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC131392.1-201ENST00000506490 633 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC004062.1-201ENST00000509926 645 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 MRPS36P2-201ENST00000512569 299 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORA40.13-201ENST00000516379 120 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 RN7SKP70-201ENST00000516655 271 ntBASIC2.11□□□□□ -2.07
KRTAP4-3Q9BYR4 Y_RNA.777-201ENST00000516982 102 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms