Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 APOOP1-201ENST00000604695 592 ntBASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 RNU6-89P-201ENST00000606519 100 ntBASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 MIR6837-201ENST00000620884 64 ntBASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 AC079776.5-201ENST00000641920 211 ntBASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 ASNSP3-201ENST00000451989 1306 ntBASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SSBP3Q9BWW4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 Y_RNA.31-201ENST00000362574 102 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 Y_RNA.187-201ENST00000363918 113 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 RNU4-1-201ENST00000363925 141 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 RNU6-1013P-201ENST00000384180 107 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 RNU6-505P-201ENST00000384427 107 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 RNU6-606P-201ENST00000384721 111 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 MT-TG-201ENST00000387429 68 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC096921.1-201ENST00000411661 375 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 MTCO1P7-201ENST00000419523 1542 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 PMCHL1-202ENST00000423102 261 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC007283.2-201ENST00000424739 197 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 CBX3P6-201ENST00000430257 527 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AL731563.1-201ENST00000442202 214 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 HSPE1P28-201ENST00000443139 211 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AP004289.2-201ENST00000444413 1457 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC002381.1-201ENST00000447049 280 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AL596266.1-201ENST00000448132 400 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 HMGN3P1-201ENST00000453847 193 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC026410.2-201ENST00000460281 156 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AL135752.1-201ENST00000479477 471 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 RPS4XP14-201ENST00000493072 781 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC093303.1-201ENST00000514549 295 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 MTCO2P24-201ENST00000515611 426 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 RNU4-29P-201ENST00000515943 174 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AL163153.1-201ENST00000554223 283 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 OR4F13P-202ENST00000560066 2054 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC092125.1-201ENST00000562568 1995 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC010266.2-201ENST00000564741 3255 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 SUMO2P15-201ENST00000604285 278 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 uc_338.22-201ENST00000622722 187 ntBASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
SSBP3Q9BWW4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.59□□□□□ -1.68
SSBP3Q9BWW4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSBP3Q9BWW4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSBP3Q9BWW4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.59□□□□□ -1.68
SSBP3Q9BWW4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SSBP3Q9BWW4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SSBP3Q9BWW4 AC003973.3-201ENST00000624863 2822 ntBASIC4.59□□□□□ -1.68
SSBP3Q9BWW4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 TCP11X1-202ENST00000622971 1372 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RNA5SP326-201ENST00000363209 110 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 Y_RNA.193-201ENST00000363979 102 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RNU6-853P-201ENST00000364306 107 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RNU6-744P-201ENST00000365557 107 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RNU6-1316P-201ENST00000384242 108 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RNU6-308P-201ENST00000390957 107 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms