Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDK5RAP2Q96SN8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.32□□□□□ -1.88
CDK5RAP2Q96SN8 AL356057.3-201ENST00000402607 340 ntBASIC3.32□□□□□ -1.88
CDK5RAP2Q96SN8 AC093331.1-201ENST00000521474 169 ntBASIC3.32□□□□□ -1.88
CDK5RAP2Q96SN8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDK5RAP2Q96SN8 AC136601.2-201ENST00000604356 474 ntBASIC3.32□□□□□ -1.88
CDK5RAP2Q96SN8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.32□□□□□ -1.88
CDK5RAP2Q96SN8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDK5RAP2Q96SN8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDK5RAP2Q96SN8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AC090229.1-201ENST00000590983 1609 ntBASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 RNA5SP107-201ENST00000411358 122 ntBASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AL121890.1-201ENST00000435457 205 ntBASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AC105402.2-201ENST00000438503 358 ntBASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 RAB28P3-201ENST00000448325 597 ntBASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 RPS3P1-201ENST00000456781 192 ntBASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AC007954.1-201ENST00000554198 494 ntBASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AC068446.3-201ENST00000555285 382 ntBASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AC009452.1-201ENST00000640823 606 ntBASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK5RAP2Q96SN8 RPL31P1-201ENST00000398116 372 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 RNA5SP274-201ENST00000410484 108 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 PTP4A1P5-201ENST00000420305 455 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AC022431.1-201ENST00000450941 438 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 RPS27P29-201ENST00000463110 252 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 RPL31P13-201ENST00000484151 370 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AP001025.2-201ENST00000490908 477 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AC243972.3-201ENST00000539655 198 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AC096947.1-201ENST00000603233 470 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AL159169.2-201ENST00000610061 1269 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AC067852.7-201ENST00000623270 535 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 ASNSP3-201ENST00000451989 1306 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 RNU4-82P-201ENST00000362443 140 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AL138827.1-201ENST00000402666 306 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 BTF3P9-201ENST00000418784 283 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 RPL21P41-201ENST00000459863 264 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AC118282.1-201ENST00000506408 765 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AC093755.1-201ENST00000512950 1023 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AC119751.1-201ENST00000513357 765 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 RN7SKP60-201ENST00000516985 239 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AL389895.1-201ENST00000554127 252 ntBASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK5RAP2Q96SN8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 OR10AB1P-202ENST00000641219 1686 ntBASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 RNA5SP239-201ENST00000410218 129 ntBASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 NDUFS5P3-201ENST00000450668 321 ntBASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 RN7SL330P-201ENST00000469709 307 ntBASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 DYNLL1P6-201ENST00000503440 264 ntBASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 IGHVIII-44-202ENST00000636235 289 ntBASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 ZNF826P-207ENST00000622273 1910 ntBASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 MAPK10-362ENST00000641864 4484 ntBASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDK5RAP2Q96SN8 RNU6-328P-201ENST00000390887 106 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 YPEL5P1-201ENST00000419731 367 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 HMGB1P25-201ENST00000468402 607 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 POU5F1P7-201ENST00000508759 541 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AL121839.1-201ENST00000556233 1185 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AC067852.4-201ENST00000590314 478 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms