Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LRCH3Q96II8 SNORD50.1-201ENST00000362987 71 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 MIR517A-201ENST00000385001 87 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 AC016696.1-201ENST00000446949 318 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 AZGP1P2-201ENST00000454506 345 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 RNU7-187P-201ENST00000458985 68 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 RN7SL705P-201ENST00000481678 294 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 RN7SL184P-201ENST00000488308 297 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 MTND6P8-201ENST00000503471 522 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 IGKV2-23-201ENST00000518729 323 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 CBX3P8-201ENST00000532412 525 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 AC025423.5-201ENST00000550230 219 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 LSM6P2-201ENST00000552208 177 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 CYP3A51P-201ENST00000633513 256 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LRCH3Q96II8 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LRCH3Q96II8 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LRCH3Q96II8 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LRCH3Q96II8 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 AC104837.1-201ENST00000444644 1587 ntBASIC6.82□□□□□ -1.32
LRCH3Q96II8 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LRCH3Q96II8 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
LRCH3Q96II8 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 RNU6-214P-201ENST00000384130 107 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 RPEP5-201ENST00000441137 268 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 RPS7P3-201ENST00000443360 580 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 CEACAMP6-201ENST00000452007 574 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 AC009963.2-201ENST00000453431 138 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 AL355032.1-201ENST00000472981 438 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 RNU6-685P-201ENST00000517088 95 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 MTND5P41-201ENST00000517498 206 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 AC012339.2-201ENST00000523996 453 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 RANP3-201ENST00000530970 276 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 AC004584.2-201ENST00000570407 410 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 AC008521.1-201ENST00000587471 187 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 AC012443.1-201ENST00000605605 231 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 MIR6809-201ENST00000612189 116 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.81□□□□□ -1.32
LRCH3Q96II8 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 TRIM51GP-201ENST00000534741 1350 ntBASIC6.81□□□□□ -1.32
LRCH3Q96II8 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LRCH3Q96II8 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LRCH3Q96II8 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
LRCH3Q96II8 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LRCH3Q96II8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LRCH3Q96II8 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LRCH3Q96II8 MIR375-201ENST00000362103 64 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 AL024474.1-201ENST00000404655 591 ntBASIC6.8□□□□□ -1.32
LRCH3Q96II8 HMGN1P24-201ENST00000412282 298 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms