Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.33□□□□□ -1.72
CTHRC1Q96CG8 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC114546.3-201ENST00000623582 1734 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 RN7SKP224-201ENST00000364140 325 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 RNU6-297P-201ENST00000384636 107 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 MIR192-201ENST00000384915 110 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 Z74021.1-201ENST00000423610 407 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 NANOGP6-201ENST00000429190 847 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC073614.1-201ENST00000438690 650 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 HMGB3P9-201ENST00000441799 583 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC011753.3-201ENST00000443436 406 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 RPL7P36-201ENST00000444633 681 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 ISCUP1-201ENST00000454451 448 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 BX322784.1-201ENST00000455793 1077 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC099563.1-201ENST00000456086 418 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 RPS29P33-201ENST00000456717 146 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC006967.1-201ENST00000467608 589 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC007016.1-201ENST00000512110 244 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 KCTD9P2-201ENST00000512203 1013 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 OR5M7P-201ENST00000526140 972 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 DEFB108A-201ENST00000530110 222 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 ZNF519P2-201ENST00000557032 169 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC068944.2-201ENST00000610373 403 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC000123.2-201ENST00000623124 461 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 U3.53-201ENST00000628922 216 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 MAPK10-263ENST00000641052 4307 ntBASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTHRC1Q96CG8 AC104118.1-201ENST00000607625 1589 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 ZNF137P-201ENST00000456718 1920 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 RN7SKP115-201ENST00000363177 317 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 RNU6-769P-201ENST00000384407 104 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 MIR298-201ENST00000401212 88 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 Z98745.1-201ENST00000402553 494 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 RNU6-248P-201ENST00000410720 107 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 RPL26P29-201ENST00000415623 438 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 RAD23BP1-201ENST00000421404 1227 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 RPL22P17-201ENST00000438729 315 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AL031667.1-201ENST00000440222 725 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC002381.1-201ENST00000447049 280 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC073264.2-201ENST00000448886 166 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC010326.1-201ENST00000462726 602 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC022795.1-201ENST00000473808 480 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC126182.1-201ENST00000478134 357 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 RNU6-1178P-201ENST00000516674 107 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms