Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AP002812.4-201ENST00000532139 286 ntBASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 AL049870.4-201ENST00000555741 486 ntBASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 AC100793.4-201ENST00000613683 429 ntBASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.74□□□□□ -1.97
RPS4Y2Q8TD47 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AC073325.2-201ENST00000339545 159 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 SNORA31-201ENST00000362607 130 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 OR6K3-202ENST00000368146 996 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 MIR591-201ENST00000385290 95 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 HMGB1P13-201ENST00000406019 642 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AL158156.1-201ENST00000422509 473 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 ARL5AP2-201ENST00000444698 533 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 SLC31A1P1-201ENST00000451221 567 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AC092754.2-201ENST00000463506 460 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AP004217.1-201ENST00000480579 346 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 RN7SL20P-201ENST00000488827 297 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AL358832.1-201ENST00000497800 389 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 HMGB3P15-201ENST00000507326 574 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AC110792.2-201ENST00000510278 224 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 PCNAP1-202ENST00000595299 752 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 AC015849.2-201ENST00000605738 409 ntBASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.73□□□□□ -1.97
RPS4Y2Q8TD47 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 XPOTP1-201ENST00000443317 2398 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 RNU4-23P-201ENST00000362839 140 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 RNA5SP267-201ENST00000364893 126 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 MIR421-201ENST00000365696 85 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AP000567.1-201ENST00000406413 156 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 SETP5-201ENST00000437270 562 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 RPL34P26-201ENST00000445636 354 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 NPM1P49-201ENST00000448027 714 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 HMGB1P5-202ENST00000451497 985 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 CAB39P1-201ENST00000502277 460 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AC110794.1-201ENST00000505816 425 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 RN7SKP234-201ENST00000517173 224 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AC010198.2-201ENST00000550612 259 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AL121594.4-201ENST00000556211 1196 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AC005412.1-201ENST00000580812 1049 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 ZNF415P1-201ENST00000582279 1166 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 ZNF92P3-201ENST00000596594 954 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AL392112.1-201ENST00000605115 829 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 SNORA50A-202ENST00000629536 136 ntBASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.72□□□□□ -1.97
RPS4Y2Q8TD47 AC022031.1-201ENST00000585985 2593 ntBASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 AL049737.1-201ENST00000413920 1403 ntBASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 RNU4-31P-201ENST00000384211 141 ntBASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 SNORA7.4-201ENST00000384249 137 ntBASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 RNU6-452P-201ENST00000384406 107 ntBASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 RNVU1-14-201ENST00000384770 164 ntBASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.71□□□□□ -1.98
RPS4Y2Q8TD47 BMS1P22-201ENST00000414726 313 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms