Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 HMGB3P23-201ENST00000414981 585 ntBASIC3.59□□□□□ -1.83
RTL9Q8NET4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL9Q8NET4 NPM1P24-201ENST00000428039 894 ntBASIC3.59□□□□□ -1.83
RTL9Q8NET4 RPL21P40-201ENST00000428586 483 ntBASIC3.59□□□□□ -1.83
RTL9Q8NET4 NIPA2P5-201ENST00000452282 464 ntBASIC3.59□□□□□ -1.83
RTL9Q8NET4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.59□□□□□ -1.83
RTL9Q8NET4 AC126389.1-201ENST00000477436 290 ntBASIC3.59□□□□□ -1.83
RTL9Q8NET4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL9Q8NET4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.59□□□□□ -1.83
RTL9Q8NET4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.59□□□□□ -1.83
RTL9Q8NET4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.59□□□□□ -1.83
RTL9Q8NET4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RTL9Q8NET4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.59□□□□□ -1.83
RTL9Q8NET4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.59□□□□□ -1.83
RTL9Q8NET4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.59□□□□□ -1.83
RTL9Q8NET4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.59□□□□□ -1.83
RTL9Q8NET4 ZNF542P-204ENST00000482727 1305 ntBASIC3.59□□□□□ -1.84
RTL9Q8NET4 GABRG2-229ENST00000641017 3628 ntBASIC3.58□□□□□ -1.84
RTL9Q8NET4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RTL9Q8NET4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTL9Q8NET4 XGY1-201ENST00000381172 446 ntBASIC3.58□□□□□ -1.84
RTL9Q8NET4 Z93242.1-201ENST00000427102 353 ntBASIC3.58□□□□□ -1.84
RTL9Q8NET4 B3GNT2P1-201ENST00000434960 952 ntBASIC3.58□□□□□ -1.84
RTL9Q8NET4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL9Q8NET4 CLIC4P1-201ENST00000453177 535 ntBASIC3.58□□□□□ -1.84
RTL9Q8NET4 AC078785.3-201ENST00000476607 425 ntBASIC3.58□□□□□ -1.84
RTL9Q8NET4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL9Q8NET4 TXNP6-201ENST00000510190 310 ntBASIC3.58□□□□□ -1.84
RTL9Q8NET4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.58□□□□□ -1.84
RTL9Q8NET4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL9Q8NET4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL9Q8NET4 RPL23AP92-201ENST00000603609 255 ntBASIC3.58□□□□□ -1.84
RTL9Q8NET4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL9Q8NET4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL9Q8NET4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL9Q8NET4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
RTL9Q8NET4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RTL9Q8NET4 AC245054.2-201ENST00000415639 319 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 AC073508.1-201ENST00000428866 656 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.57□□□□□ -1.84
RTL9Q8NET4 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 RAB28P3-201ENST00000448325 597 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 AL162389.1-201ENST00000449233 177 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 AC233982.1-201ENST00000451247 436 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 SETP12-201ENST00000514068 805 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTL9Q8NET4 AC007619.2-201ENST00000605743 379 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 PLCE1P1-201ENST00000622094 305 ntBASIC3.57□□□□□ -1.84
RTL9Q8NET4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTL9Q8NET4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RTL9Q8NET4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTL9Q8NET4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RTL9Q8NET4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.56□□□□□ -1.84
RTL9Q8NET4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTL9Q8NET4 SNORA46-201ENST00000384762 135 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 RPL31P1-201ENST00000398116 372 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 RNU6-603P-201ENST00000411403 107 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 DUTP6-201ENST00000425573 462 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 AL353093.1-201ENST00000441292 436 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 TXNP1-201ENST00000441872 371 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.56□□□□□ -1.84
RTL9Q8NET4 RPL29P29-201ENST00000448725 423 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.56□□□□□ -1.84
RTL9Q8NET4 RN7SL633P-201ENST00000488974 297 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 AC111000.2-201ENST00000507775 550 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 AC034159.1-201ENST00000513885 583 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 AC093331.1-201ENST00000521474 169 ntBASIC3.56□□□□□ -1.84
RTL9Q8NET4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.56□□□□□ -1.84
RTL9Q8NET4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.56□□□□□ -1.84
RTL9Q8NET4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.56□□□□□ -1.84
RTL9Q8NET4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.56□□□□□ -1.84
RTL9Q8NET4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.56□□□□□ -1.84
RTL9Q8NET4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTL9Q8NET4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RTL9Q8NET4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTL9Q8NET4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTL9Q8NET4 U3.12-201ENST00000364498 214 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 AL360182.1-201ENST00000397433 468 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 AL445529.1-201ENST00000398713 389 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 RNU2-52P-201ENST00000410680 190 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 AC007390.1-201ENST00000415722 356 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 AIMP1P1-201ENST00000418670 937 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 AC063976.3-201ENST00000426849 329 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 AC087499.2-201ENST00000432861 149 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 UQCRHP3-201ENST00000451503 251 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTL9Q8NET4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.55□□□□□ -1.84
RTL9Q8NET4 AP001086.1-201ENST00000494882 321 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 SNORD116-26-201ENST00000516006 96 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 AC245166.1-201ENST00000521012 253 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 AC123786.2-201ENST00000603459 275 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 AL035413.2-201ENST00000604801 525 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.55□□□□□ -1.84
RTL9Q8NET4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.55□□□□□ -1.84
RTL9Q8NET4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.55□□□□□ -1.84
RTL9Q8NET4 AC090229.1-201ENST00000590983 1609 ntBASIC3.55□□□□□ -1.84
RTL9Q8NET4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTL9Q8NET4 AC004972.1-201ENST00000623934 2209 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms