Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 RNA5SP315-201ENST00000516340 116 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 RNA5SP312-201ENST00000517068 116 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 HMGB1P23-201ENST00000518743 568 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 OR5AK1P-201ENST00000524837 922 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC020914.6-201ENST00000594327 272 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC091805.2-201ENST00000603848 235 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC010200.2-201ENST00000605098 235 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AL591034.3-201ENST00000605511 685 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC008498.1-201ENST00000613012 531 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC013476.2-201ENST00000614456 459 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC091905.2-201ENST00000623143 306 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC025048.6-202ENST00000627667 438 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC092447.7-201ENST00000422212 1621 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AL158163.1-201ENST00000603915 1649 ntBASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF548Q8NEK5 AC095050.2-201ENST00000510748 1458 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC046144.1-201ENST00000478559 1853 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC107027.3-201ENST00000565095 3473 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 SUGT1P1-201ENST00000379514 476 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 RNU1-63P-201ENST00000383902 164 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 RNU1-13P-201ENST00000384499 162 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AL022722.2-201ENST00000402519 180 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 RN7SKP33-201ENST00000410942 340 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 GSTM3P2-201ENST00000412746 530 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 FNDC3CP-201ENST00000420795 1155 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 EIF1P1-201ENST00000421436 341 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 RPS26P47-201ENST00000427219 348 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 MRPS10P2-201ENST00000431226 381 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 OR4C10P-201ENST00000434991 931 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 LARP1BP3-201ENST00000437229 869 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 RBMX2P4-201ENST00000441256 376 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC114495.1-201ENST00000441274 436 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 SSXP1-201ENST00000453640 473 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AP000942.1-201ENST00000463969 747 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC126182.1-201ENST00000478134 357 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 RPL35P6-201ENST00000490024 372 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC093281.2-201ENST00000510153 597 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC048346.1-201ENST00000510247 144 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 RFPL4AP5-201ENST00000514977 504 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AL133241.1-201ENST00000556832 487 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC233280.2-201ENST00000603917 1070 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC126118.1-201ENST00000607744 628 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AP001596.2-201ENST00000608410 312 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC109347.2-201ENST00000610220 349 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 U6.42-201ENST00000618440 107 ntBASIC4.3□□□□□ -1.72
ZNF548Q8NEK5 AC116563.2-201ENST00000624751 535 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms