Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 MIR5186-201ENST00000577504 120 ntBASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 MIR1254-2-201ENST00000579553 63 ntBASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 MIR3138-201ENST00000585238 82 ntBASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 AL031985.2-201ENST00000600955 480 ntBASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 AC090948.1-201ENST00000607464 549 ntBASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 AC020634.1-201ENST00000608701 549 ntBASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 AC090116.1-201ENST00000615679 446 ntBASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 AL356596.1-201ENST00000624230 379 ntBASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 AC055839.1-201ENST00000634467 498 ntBASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC33Q8N5R6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 ZNF734P-201ENST00000419494 1534 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 RNA5SP28-201ENST00000363841 119 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 RPL31P1-201ENST00000398116 372 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 SEPT2P1-201ENST00000419651 180 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AL356387.2-201ENST00000422272 243 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC244035.1-201ENST00000430042 390 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AL356276.2-201ENST00000435919 558 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 SNRPEP7-201ENST00000438350 220 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC005798.1-201ENST00000513715 387 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 RNA5SP446-201ENST00000515955 82 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 DEFB109D-201ENST00000529497 240 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 PSMB7P1-201ENST00000556349 514 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 NBR2-204ENST00000587322 63 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 SLC25A36P1-201ENST00000590111 465 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AF131215.7-201ENST00000602443 707 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 MTCYBP22-201ENST00000603788 447 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC114781.5-201ENST00000615297 108 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC008443.7-201ENST00000622195 246 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC092192.1-201ENST00000633154 1018 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 ZNF833P-201ENST00000424938 1494 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 AC090229.1-201ENST00000590983 1609 ntBASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC33Q8N5R6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 AC021755.1-201ENST00000559747 1447 ntBASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 RNA5SP515-201ENST00000364570 118 ntBASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 SNORD82-201ENST00000365530 70 ntBASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 TPMTP3-201ENST00000411928 735 ntBASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 NPM1P11-201ENST00000417106 855 ntBASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 AC098826.1-201ENST00000433943 471 ntBASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 AL117351.1-201ENST00000438864 766 ntBASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 RPL23AP65-201ENST00000475608 468 ntBASIC4.67□□□□□ -1.66
CCDC33Q8N5R6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms