Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC005189.1-201ENST00000431286 310 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 HMGB1P12-201ENST00000438594 598 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 RNFT1P2-201ENST00000443064 757 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 HMGN1P18-201ENST00000457642 277 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 ARPC3P2-201ENST00000457786 533 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC096992.1-201ENST00000459808 709 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 RPL6P9-201ENST00000466502 859 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC090071.1-201ENST00000507713 644 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 TXNP6-201ENST00000510190 310 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 PTGES3P3-201ENST00000511479 482 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 LINC00557-201ENST00000563184 1279 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC037471.2-201ENST00000564941 598 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC090751.1-201ENST00000566966 267 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 MIR4474-201ENST00000579189 78 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 MIR4276-201ENST00000584832 70 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC079880.2-201ENST00000603790 1213 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC245389.1-201ENST00000605141 529 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AC016877.3-201ENST00000606778 504 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AL451074.6-201ENST00000608512 729 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 uc_338.1-201ENST00000612113 180 ntBASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC65Q8IXS2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 RNA5SP391-201ENST00000363456 119 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 RNA5SP31-201ENST00000411144 127 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 AC069157.1-201ENST00000421749 137 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 DPPA2P1-201ENST00000428060 556 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 HMGB3P11-201ENST00000440127 604 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 AC104689.1-201ENST00000473356 768 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 RN7SL293P-201ENST00000481765 281 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 AP002812.1-201ENST00000495378 474 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 AC008562.1-201ENST00000521763 330 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 AC004024.1-201ENST00000549244 247 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 SYF2P1-201ENST00000550658 413 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 AC009948.4-201ENST00000604692 675 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 AC110774.1-201ENST00000623567 2018 ntBASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC65Q8IXS2 MTND5P11-201ENST00000511037 1812 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC010733.2-201ENST00000589496 5702 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 RNU6-792P-201ENST00000363490 107 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 MIR490-201ENST00000384865 128 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 MIR449B-201ENST00000384995 97 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 ATP5F1P3-201ENST00000397213 657 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 SKINT1L-201ENST00000401057 817 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 BX323014.1-201ENST00000412876 237 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 RPS7P15-201ENST00000415804 584 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC073508.1-201ENST00000428866 656 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 ETF1P3-201ENST00000430422 1160 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC068135.1-201ENST00000446164 246 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 CYCSP35-201ENST00000451978 304 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC091179.1-201ENST00000461606 579 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 RPS27P29-201ENST00000463110 252 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC146507.1-201ENST00000468335 354 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 SNORA76.2-201ENST00000517095 137 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 HMGB1P23-201ENST00000518743 568 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 COX6B1P6-201ENST00000522347 255 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 OR4H12P-201ENST00000556269 907 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 ZNF92P2-201ENST00000600543 1059 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 NTAN1P1-201ENST00000603150 646 ntBASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC65Q8IXS2 Z83843.1-201ENST00000604070 3685 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms