Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CNTN1Q12860 MFSD8-245ENST00000641743 948 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CNTN1Q12860 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.74□□□□□ -1.81
CNTN1Q12860 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.74□□□□□ -1.81
CNTN1Q12860 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CNTN1Q12860 DCAF13P3-201ENST00000561147 1334 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CNTN1Q12860 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CNTN1Q12860 ZNF29P-201ENST00000225587 168 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 HMGB1P5-201ENST00000255320 642 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CNTN1Q12860 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CNTN1Q12860 Y_RNA.472-201ENST00000384322 102 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 SNORD116-12-201ENST00000384468 92 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 SNORD116-23-201ENST00000384645 92 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 MIR217-201ENST00000384817 110 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 MIR7-3-201ENST00000384898 110 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 RNA5SP424-201ENST00000390988 115 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CNTN1Q12860 TMSB4XP8-201ENST00000402089 135 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 MTCO3P31-201ENST00000405526 789 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 ATP5A1P2-201ENST00000412323 255 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 RPS29P4-201ENST00000414733 161 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 TMSB4XP6-201ENST00000415187 135 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 HSFY1P1-201ENST00000423928 1178 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 TMSB4XP1-201ENST00000424567 135 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.73□□□□□ -1.81
CNTN1Q12860 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.73□□□□□ -1.81
CNTN1Q12860 AC114973.1-201ENST00000429057 632 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 UBE2V1P1-201ENST00000430836 445 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 HMGB3P6-201ENST00000444896 598 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 AL606517.1-201ENST00000446914 387 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 HMGB1P16-201ENST00000447155 540 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 COX6CP18-201ENST00000448769 222 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 PDSS1P2-201ENST00000449397 678 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 RPL37P6-202ENST00000464216 403 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.73□□□□□ -1.81
CNTN1Q12860 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.73□□□□□ -1.81
CNTN1Q12860 AP000619.3-201ENST00000535634 1127 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.73□□□□□ -1.81
CNTN1Q12860 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.73□□□□□ -1.81
CNTN1Q12860 MTCO2P2-201ENST00000591258 225 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 RPP40P2-201ENST00000603596 712 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 HMGB1P50-201ENST00000605814 607 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 RNU4-5P-201ENST00000607255 135 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 AC069200.1-201ENST00000609511 323 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 AL050303.3-201ENST00000613704 284 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 AL391261.4-201ENST00000616012 481 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 AL121895.2-201ENST00000619558 447 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 AL157770.1-201ENST00000623049 439 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 OR1S1-201ENST00000624470 978 ntBASIC3.73□□□□□ -1.81
CNTN1Q12860 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.73□□□□□ -1.81
CNTN1Q12860 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.73□□□□□ -1.81
CNTN1Q12860 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.72□□□□□ -1.81
CNTN1Q12860 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.72□□□□□ -1.81
CNTN1Q12860 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CNTN1Q12860 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CNTN1Q12860 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CNTN1Q12860 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CNTN1Q12860 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.72□□□□□ -1.81
CNTN1Q12860 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CNTN1Q12860 RNU6-582P-201ENST00000362989 107 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 ATP5F1P4-201ENST00000397288 746 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CNTN1Q12860 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.72□□□□□ -1.81
CNTN1Q12860 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CNTN1Q12860 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.72□□□□□ -1.81
CNTN1Q12860 AC068533.1-201ENST00000418542 415 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 RPS15AP40-201ENST00000419621 391 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.72□□□□□ -1.81
CNTN1Q12860 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.72□□□□□ -1.81
CNTN1Q12860 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 RPF2P1-201ENST00000424137 906 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.72□□□□□ -1.81
CNTN1Q12860 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.72□□□□□ -1.81
CNTN1Q12860 Z93242.1-201ENST00000427102 353 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AC008065.1-201ENST00000428525 348 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AC006946.1-201ENST00000429106 328 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 MTCO1P3-201ENST00000429327 192 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AC112492.1-201ENST00000449607 712 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AL645939.1-201ENST00000453429 797 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 DNAJC19P1-201ENST00000455312 319 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.72□□□□□ -1.81
CNTN1Q12860 snoU13.22-201ENST00000459428 104 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.72□□□□□ -1.81
CNTN1Q12860 AC087385.1-201ENST00000475062 312 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AP000926.1-201ENST00000479573 241 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.72□□□□□ -1.81
CNTN1Q12860 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.72□□□□□ -1.81
CNTN1Q12860 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.72□□□□□ -1.81
CNTN1Q12860 AC005798.1-201ENST00000513715 387 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 IGKV2D-23-201ENST00000518179 286 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.72□□□□□ -1.81
CNTN1Q12860 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.72□□□□□ -1.81
CNTN1Q12860 OR7E13P-201ENST00000526052 910 ntBASIC3.72□□□□□ -1.81
CNTN1Q12860 PTP4A1P6-201ENST00000531034 478 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms