Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.4□□□□□ -2.03
CCL20P78556 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.4□□□□□ -2.03
CCL20P78556 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.4□□□□□ -2.03
CCL20P78556 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
CCL20P78556 AC008745.1-201ENST00000604064 271 ntBASIC2.4□□□□□ -2.03
CCL20P78556 AL451074.6-201ENST00000608512 729 ntBASIC2.4□□□□□ -2.03
CCL20P78556 AC090912.3-201ENST00000609775 533 ntBASIC2.4□□□□□ -2.03
CCL20P78556 AC100793.4-201ENST00000613683 429 ntBASIC2.4□□□□□ -2.03
CCL20P78556 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.4□□□□□ -2.03
CCL20P78556 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.4□□□□□ -2.03
CCL20P78556 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.4□□□□□ -2.03
CCL20P78556 AL392088.2-201ENST00000637607 285 ntBASIC2.4□□□□□ -2.03
CCL20P78556 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCL20P78556 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.4□□□□□ -2.03
CCL20P78556 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.4□□□□□ -2.03
CCL20P78556 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.39□□□□□ -2.03
CCL20P78556 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.39□□□□□ -2.03
CCL20P78556 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
CCL20P78556 AL365440.1-201ENST00000436135 2167 ntBASIC2.39□□□□□ -2.03
CCL20P78556 RNU6-1243P-201ENST00000364028 107 ntBASIC2.39□□□□□ -2.03
CCL20P78556 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.39□□□□□ -2.03
CCL20P78556 RNU1-13P-201ENST00000384499 162 ntBASIC2.39□□□□□ -2.03
CCL20P78556 MIR142-201ENST00000384835 87 ntBASIC2.39□□□□□ -2.03
CCL20P78556 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCL20P78556 MTND4P13-201ENST00000402078 1023 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC109780.2-201ENST00000413467 845 ntBASIC2.39□□□□□ -2.03
CCL20P78556 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.39□□□□□ -2.03
CCL20P78556 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.39□□□□□ -2.03
CCL20P78556 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.39□□□□□ -2.03
CCL20P78556 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.39□□□□□ -2.03
CCL20P78556 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.39□□□□□ -2.03
CCL20P78556 RPL21P2-201ENST00000440049 481 ntBASIC2.39□□□□□ -2.03
CCL20P78556 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.39□□□□□ -2.03
CCL20P78556 RPL17P49-201ENST00000443728 411 ntBASIC2.39□□□□□ -2.03
CCL20P78556 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.39□□□□□ -2.03
CCL20P78556 MORF4L1P4-201ENST00000450245 976 ntBASIC2.39□□□□□ -2.03
CCL20P78556 ELOCP23-201ENST00000452014 332 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC073387.1-201ENST00000453261 709 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.39□□□□□ -2.03
CCL20P78556 AC008155.2-201ENST00000464337 397 ntBASIC2.39□□□□□ -2.03
CCL20P78556 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.39□□□□□ -2.03
CCL20P78556 RPS27AP9-201ENST00000477681 438 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.39□□□□□ -2.03
CCL20P78556 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.39□□□□□ -2.03
CCL20P78556 AC021678.1-201ENST00000505195 936 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.39□□□□□ -2.03
CCL20P78556 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.39□□□□□ -2.03
CCL20P78556 AC104986.1-201ENST00000517978 436 ntBASIC2.39□□□□□ -2.03
CCL20P78556 HMGB1P23-201ENST00000518743 568 ntBASIC2.39□□□□□ -2.03
CCL20P78556 TRMT10BP1-201ENST00000519377 943 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC034205.1-201ENST00000520621 638 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.39□□□□□ -2.03
CCL20P78556 AC103843.2-201ENST00000530523 682 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.39□□□□□ -2.03
CCL20P78556 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.39□□□□□ -2.03
CCL20P78556 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.39□□□□□ -2.03
CCL20P78556 AC107954.1-201ENST00000565906 727 ntBASIC2.39□□□□□ -2.03
CCL20P78556 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCL20P78556 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.39□□□□□ -2.03
CCL20P78556 AC006504.3-201ENST00000586818 523 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC007566.2-201ENST00000603642 413 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC073111.2-201ENST00000605657 1075 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC004832.5-201ENST00000608677 401 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC084036.1-201ENST00000609190 508 ntBASIC2.39□□□□□ -2.03
CCL20P78556 AC005962.2-201ENST00000611427 652 ntBASIC2.39□□□□□ -2.03
CCL20P78556 MLECP1-201ENST00000615893 709 ntBASIC2.39□□□□□ -2.03
CCL20P78556 Z99129.2-201ENST00000619967 314 ntBASIC2.39□□□□□ -2.03
CCL20P78556 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.39□□□□□ -2.03
CCL20P78556 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CCL20P78556 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCL20P78556 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCL20P78556 AC116096.1-201ENST00000566804 2314 ntBASIC2.39□□□□□ -2.03
CCL20P78556 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCL20P78556 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCL20P78556 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.38□□□□□ -2.03
CCL20P78556 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCL20P78556 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.38□□□□□ -2.03
CCL20P78556 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCL20P78556 RNU6-50P-201ENST00000362356 103 ntBASIC2.38□□□□□ -2.03
CCL20P78556 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.38□□□□□ -2.03
CCL20P78556 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCL20P78556 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.38□□□□□ -2.03
CCL20P78556 AC007394.1-201ENST00000421941 531 ntBASIC2.38□□□□□ -2.03
CCL20P78556 RPL21P40-201ENST00000428586 483 ntBASIC2.38□□□□□ -2.03
CCL20P78556 UBE2V1P1-201ENST00000430836 445 ntBASIC2.38□□□□□ -2.03
CCL20P78556 RPL21P110-201ENST00000433345 446 ntBASIC2.38□□□□□ -2.03
CCL20P78556 OR4C10P-201ENST00000434991 931 ntBASIC2.38□□□□□ -2.03
CCL20P78556 RPS7P2-201ENST00000435134 607 ntBASIC2.38□□□□□ -2.03
CCL20P78556 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.38□□□□□ -2.03
CCL20P78556 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.38□□□□□ -2.03
CCL20P78556 AL592437.1-201ENST00000443781 492 ntBASIC2.38□□□□□ -2.03
CCL20P78556 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.38□□□□□ -2.03
CCL20P78556 NPM1P13-201ENST00000452663 865 ntBASIC2.38□□□□□ -2.03
CCL20P78556 RPS24P6-201ENST00000452670 400 ntBASIC2.38□□□□□ -2.03
CCL20P78556 HMGB1P15-201ENST00000453854 435 ntBASIC2.38□□□□□ -2.03
CCL20P78556 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.38□□□□□ -2.03
CCL20P78556 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.38□□□□□ -2.03
CCL20P78556 RPL21P10-201ENST00000463521 490 ntBASIC2.38□□□□□ -2.03
CCL20P78556 RN7SL610P-201ENST00000463845 291 ntBASIC2.38□□□□□ -2.03
CCL20P78556 PRDX3P4-201ENST00000470828 747 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms