Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.27□□□□□ -1.73
RAE1P78406 GDI2P2-201ENST00000445131 608 ntBASIC4.27□□□□□ -1.73
RAE1P78406 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.27□□□□□ -1.73
RAE1P78406 PDSS1P2-201ENST00000449397 678 ntBASIC4.27□□□□□ -1.73
RAE1P78406 OR6K1P-201ENST00000456766 971 ntBASIC4.27□□□□□ -1.73
RAE1P78406 AC010326.1-201ENST00000462726 602 ntBASIC4.27□□□□□ -1.73
RAE1P78406 AC006967.1-201ENST00000467608 589 ntBASIC4.27□□□□□ -1.73
RAE1P78406 RN7SL41P-201ENST00000476144 297 ntBASIC4.27□□□□□ -1.73
RAE1P78406 BNIP3P41-201ENST00000503774 571 ntBASIC4.27□□□□□ -1.73
RAE1P78406 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.27□□□□□ -1.73
RAE1P78406 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 AP001781.1-201ENST00000530977 207 ntBASIC4.27□□□□□ -1.73
RAE1P78406 OR5D15P-201ENST00000531671 942 ntBASIC4.27□□□□□ -1.73
RAE1P78406 MIR5697-201ENST00000578045 78 ntBASIC4.27□□□□□ -1.73
RAE1P78406 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.27□□□□□ -1.73
RAE1P78406 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.27□□□□□ -1.73
RAE1P78406 AP001180.3-201ENST00000582221 145 ntBASIC4.27□□□□□ -1.73
RAE1P78406 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.27□□□□□ -1.73
RAE1P78406 AC011477.5-201ENST00000586571 259 ntBASIC4.27□□□□□ -1.73
RAE1P78406 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.27□□□□□ -1.73
RAE1P78406 AL160290.3-201ENST00000604869 165 ntBASIC4.27□□□□□ -1.73
RAE1P78406 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 AC009318.4-201ENST00000620496 486 ntBASIC4.27□□□□□ -1.73
RAE1P78406 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.27□□□□□ -1.73
RAE1P78406 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 MAPK10-286ENST00000641208 8747 ntBASIC4.27□□□□□ -1.73
RAE1P78406 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 AC027514.1-201ENST00000588561 1603 ntBASIC4.27□□□□□ -1.73
RAE1P78406 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 AC104118.1-201ENST00000607625 1589 ntBASIC4.27□□□□□ -1.73
RAE1P78406 AC017104.4-201ENST00000636283 1592 ntBASIC4.27□□□□□ -1.73
RAE1P78406 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RAE1P78406 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RAE1P78406 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RAE1P78406 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RAE1P78406 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.26□□□□□ -1.73
RAE1P78406 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RAE1P78406 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RAE1P78406 OR11H5P-202ENST00000641612 1325 ntBASIC4.26□□□□□ -1.73
RAE1P78406 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.26□□□□□ -1.73
RAE1P78406 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 AC092435.4-201ENST00000623012 4159 ntBASIC4.26□□□□□ -1.73
RAE1P78406 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RAE1P78406 OR11H4-201ENST00000315409 1082 ntBASIC4.26□□□□□ -1.73
RAE1P78406 RNA5SP307-201ENST00000362863 116 ntBASIC4.26□□□□□ -1.73
RAE1P78406 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 SNORA70F-201ENST00000384142 135 ntBASIC4.26□□□□□ -1.73
RAE1P78406 RNU6-517P-201ENST00000384362 110 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AL031679.1-201ENST00000400616 525 ntBASIC4.26□□□□□ -1.73
RAE1P78406 RN7SKP33-201ENST00000410942 340 ntBASIC4.26□□□□□ -1.73
RAE1P78406 RPL31P2-201ENST00000413849 377 ntBASIC4.26□□□□□ -1.73
RAE1P78406 UBE2V1P10-201ENST00000414685 269 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.26□□□□□ -1.73
RAE1P78406 AL513174.1-201ENST00000423182 629 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.26□□□□□ -1.73
RAE1P78406 OR4F13P-201ENST00000428478 931 ntBASIC4.26□□□□□ -1.73
RAE1P78406 RPL23AP25-201ENST00000430973 463 ntBASIC4.26□□□□□ -1.73
RAE1P78406 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 RPEP2-201ENST00000432149 701 ntBASIC4.26□□□□□ -1.73
RAE1P78406 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.26□□□□□ -1.73
RAE1P78406 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.26□□□□□ -1.73
RAE1P78406 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.26□□□□□ -1.73
RAE1P78406 RPL7P31-201ENST00000450192 724 ntBASIC4.26□□□□□ -1.73
RAE1P78406 BX322784.1-201ENST00000455793 1077 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.26□□□□□ -1.73
RAE1P78406 AL136126.1-201ENST00000473603 402 ntBASIC4.26□□□□□ -1.73
RAE1P78406 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.26□□□□□ -1.73
RAE1P78406 AC012158.1-204ENST00000483430 465 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 AC010460.1-201ENST00000507087 466 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.26□□□□□ -1.73
RAE1P78406 AC108064.1-201ENST00000513791 460 ntBASIC4.26□□□□□ -1.73
RAE1P78406 SNORD116-26-201ENST00000516006 96 ntBASIC4.26□□□□□ -1.73
RAE1P78406 RN7SKP82-201ENST00000516786 223 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AC022861.1-201ENST00000522981 663 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AP003392.2-201ENST00000527269 208 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.26□□□□□ -1.73
RAE1P78406 AC100770.1-201ENST00000532310 322 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.26□□□□□ -1.73
RAE1P78406 AC245505.1-201ENST00000556398 224 ntBASIC4.26□□□□□ -1.73
RAE1P78406 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.26□□□□□ -1.73
RAE1P78406 AC084757.1-201ENST00000559987 490 ntBASIC4.26□□□□□ -1.73
RAE1P78406 MIR4528-201ENST00000577763 90 ntBASIC4.26□□□□□ -1.73
RAE1P78406 MIR4480-201ENST00000582492 71 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.26□□□□□ -1.73
RAE1P78406 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 AC015871.2-201ENST00000603605 948 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AC020634.1-201ENST00000608701 549 ntBASIC4.26□□□□□ -1.73
RAE1P78406 AC006566.1-201ENST00000608943 513 ntBASIC4.26□□□□□ -1.73
RAE1P78406 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.26□□□□□ -1.73
RAE1P78406 AC109347.2-201ENST00000610220 349 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms