Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ACTG1P13-201ENST00000486987 1043 ntBASIC3.22□□□□□ -1.89
VSX2P58304 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 CAB39P1-201ENST00000502277 460 ntBASIC3.22□□□□□ -1.89
VSX2P58304 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
VSX2P58304 AC112198.1-201ENST00000505369 1220 ntBASIC3.22□□□□□ -1.89
VSX2P58304 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.22□□□□□ -1.89
VSX2P58304 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.22□□□□□ -1.89
VSX2P58304 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.22□□□□□ -1.89
VSX2P58304 AC083923.1-201ENST00000523708 376 ntBASIC3.22□□□□□ -1.89
VSX2P58304 OR5D17P-201ENST00000531492 978 ntBASIC3.22□□□□□ -1.89
VSX2P58304 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.22□□□□□ -1.89
VSX2P58304 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.22□□□□□ -1.89
VSX2P58304 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.22□□□□□ -1.89
VSX2P58304 AC079610.2-201ENST00000604818 690 ntBASIC3.22□□□□□ -1.89
VSX2P58304 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.22□□□□□ -1.89
VSX2P58304 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.22□□□□□ -1.89
VSX2P58304 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.22□□□□□ -1.89
VSX2P58304 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.22□□□□□ -1.89
VSX2P58304 HPVC1-201ENST00000629899 1198 ntBASIC3.22□□□□□ -1.89
VSX2P58304 AL163152.1-201ENST00000642001 374 ntBASIC3.22□□□□□ -1.89
VSX2P58304 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VSX2P58304 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 AC092326.2-201ENST00000624772 1561 ntBASIC3.21□□□□□ -1.89
VSX2P58304 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VSX2P58304 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
VSX2P58304 RNA5SP267-201ENST00000364893 126 ntBASIC3.21□□□□□ -1.9
VSX2P58304 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VSX2P58304 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.21□□□□□ -1.9
VSX2P58304 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VSX2P58304 AC126124.2-201ENST00000413542 321 ntBASIC3.21□□□□□ -1.9
VSX2P58304 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.21□□□□□ -1.9
VSX2P58304 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.21□□□□□ -1.9
VSX2P58304 RNFT1P2-201ENST00000443064 757 ntBASIC3.21□□□□□ -1.9
VSX2P58304 RPS26P30-201ENST00000443431 335 ntBASIC3.21□□□□□ -1.9
VSX2P58304 AC008264.1-201ENST00000447612 367 ntBASIC3.21□□□□□ -1.9
VSX2P58304 RPS20P32-201ENST00000456044 356 ntBASIC3.21□□□□□ -1.9
VSX2P58304 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.21□□□□□ -1.9
VSX2P58304 RPS4XP22-201ENST00000480755 780 ntBASIC3.21□□□□□ -1.9
VSX2P58304 AC126121.1-201ENST00000482313 553 ntBASIC3.21□□□□□ -1.9
VSX2P58304 RPL32P34-201ENST00000486380 400 ntBASIC3.21□□□□□ -1.9
VSX2P58304 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.21□□□□□ -1.9
VSX2P58304 AC021146.5-201ENST00000503544 545 ntBASIC3.21□□□□□ -1.9
VSX2P58304 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.21□□□□□ -1.9
VSX2P58304 RN7SKP82-201ENST00000516786 223 ntBASIC3.21□□□□□ -1.9
VSX2P58304 RN7SKP116-201ENST00000516902 319 ntBASIC3.21□□□□□ -1.9
VSX2P58304 SNORA70.24-201ENST00000517233 118 ntBASIC3.21□□□□□ -1.9
VSX2P58304 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.21□□□□□ -1.9
VSX2P58304 AC107934.2-201ENST00000518653 310 ntBASIC3.21□□□□□ -1.9
VSX2P58304 IGHV3-76-201ENST00000522465 295 ntBASIC3.21□□□□□ -1.9
VSX2P58304 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.21□□□□□ -1.9
VSX2P58304 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.21□□□□□ -1.9
VSX2P58304 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.21□□□□□ -1.9
VSX2P58304 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VSX2P58304 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.21□□□□□ -1.9
VSX2P58304 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VSX2P58304 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.21□□□□□ -1.9
VSX2P58304 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VSX2P58304 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VSX2P58304 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VSX2P58304 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
VSX2P58304 AC021755.1-201ENST00000559747 1447 ntBASIC3.2□□□□□ -1.9
VSX2P58304 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.2□□□□□ -1.9
VSX2P58304 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VSX2P58304 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.2□□□□□ -1.9
VSX2P58304 AC016716.1-201ENST00000265882 708 ntBASIC3.2□□□□□ -1.9
VSX2P58304 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VSX2P58304 MIR491-201ENST00000384877 84 ntBASIC3.2□□□□□ -1.9
VSX2P58304 MIR483-201ENST00000385070 76 ntBASIC3.2□□□□□ -1.9
VSX2P58304 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
VSX2P58304 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.2□□□□□ -1.9
VSX2P58304 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VSX2P58304 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.2□□□□□ -1.9
VSX2P58304 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.2□□□□□ -1.9
VSX2P58304 AL158156.1-201ENST00000422509 473 ntBASIC3.2□□□□□ -1.9
VSX2P58304 AL513174.1-201ENST00000423182 629 ntBASIC3.2□□□□□ -1.9
VSX2P58304 ELOCP6-201ENST00000429066 328 ntBASIC3.2□□□□□ -1.9
VSX2P58304 PTP4A1P3-201ENST00000433661 420 ntBASIC3.2□□□□□ -1.9
VSX2P58304 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VSX2P58304 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.2□□□□□ -1.9
VSX2P58304 ELOCP12-201ENST00000458706 328 ntBASIC3.2□□□□□ -1.9
VSX2P58304 snoU13.24-201ENST00000458998 104 ntBASIC3.2□□□□□ -1.9
VSX2P58304 snoU13.7-201ENST00000459220 104 ntBASIC3.2□□□□□ -1.9
VSX2P58304 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
VSX2P58304 RN7SL601P-201ENST00000471221 293 ntBASIC3.2□□□□□ -1.9
VSX2P58304 RPL7P38-201ENST00000488396 739 ntBASIC3.2□□□□□ -1.9
VSX2P58304 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.2□□□□□ -1.9
VSX2P58304 AC008565.1-201ENST00000509046 885 ntBASIC3.2□□□□□ -1.9
VSX2P58304 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.2□□□□□ -1.9
VSX2P58304 TGIF1P1-201ENST00000558095 802 ntBASIC3.2□□□□□ -1.9
VSX2P58304 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.2□□□□□ -1.9
VSX2P58304 AL845331.3-202ENST00000562856 261 ntBASIC3.2□□□□□ -1.9
VSX2P58304 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.2□□□□□ -1.9
VSX2P58304 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms