Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.82□□□□□ -1.8
HMGCS2P54868 AC024023.1-201ENST00000624530 922 ntBASIC3.82□□□□□ -1.8
HMGCS2P54868 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HMGCS2P54868 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS2P54868 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGCS2P54868 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS2P54868 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS2P54868 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGCS2P54868 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGCS2P54868 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS2P54868 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HMGCS2P54868 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS2P54868 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS2P54868 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS2P54868 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS2P54868 RNU1-70P-201ENST00000362618 164 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 Y_RNA.500-201ENST00000384466 111 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AL391417.1-201ENST00000404100 426 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AL138885.1-201ENST00000405921 675 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCS2P54868 AL158071.1-201ENST00000430315 461 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AC097499.1-201ENST00000444277 208 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 MTATP6P14-201ENST00000455189 673 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGCS2P54868 MTATP6P9-201ENST00000515039 680 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS2P54868 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS2P54868 OR5AK3P-201ENST00000527486 1297 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS2P54868 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCS2P54868 AC023825.1-201ENST00000566704 1030 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS2P54868 AC099489.2-201ENST00000574976 260 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AC015917.1-201ENST00000579654 510 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.81□□□□□ -1.8
HMGCS2P54868 OR1AB1P-201ENST00000585564 761 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AC079610.2-201ENST00000604818 690 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 RNVU1-4-201ENST00000612985 164 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AC078880.5-201ENST00000617845 421 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AC007275.1-201ENST00000621243 671 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HMGCS2P54868 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCS2P54868 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
HMGCS2P54868 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.81□□□□□ -1.8
HMGCS2P54868 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS2P54868 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS2P54868 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS2P54868 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS2P54868 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCS2P54868 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS2P54868 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS2P54868 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS2P54868 RNU1-87P-201ENST00000363727 170 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 SNORA80A-201ENST00000363922 136 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 MIR142-201ENST00000384835 87 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AL590290.1-201ENST00000405336 380 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 HMGB1P13-201ENST00000406019 642 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 MIR1289-1-201ENST00000408836 144 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 RNA5SP39-201ENST00000411245 120 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS2P54868 HMGB3P31-201ENST00000413333 595 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AC008173.1-201ENST00000418901 264 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AL031736.2-201ENST00000426573 787 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AL353705.1-201ENST00000433468 480 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AF228730.2-201ENST00000438784 848 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AC008264.1-201ENST00000447612 367 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AC133473.1-201ENST00000455173 299 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AC010307.1-201ENST00000467206 836 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS2P54868 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AC022080.3-201ENST00000544433 482 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS2P54868 OR4U1P-201ENST00000554958 912 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AC006539.2-201ENST00000601729 572 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AL033523.1-201ENST00000605153 153 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AC006946.3-201ENST00000609791 756 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AC018692.3-201ENST00000623929 123 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCS2P54868 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS2P54868 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
HMGCS2P54868 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS2P54868 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGCS2P54868 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS2P54868 AL133412.1-201ENST00000380194 2992 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HMGCS2P54868 AL353743.4-201ENST00000422653 1547 ntBASIC3.8□□□□□ -1.8
HMGCS2P54868 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS2P54868 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS2P54868 AC012020.1-201ENST00000624541 1728 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms