Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ELOCP18-201ENST00000434209 337 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.07□□□□□ -1.76
LIMK1P53667 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.07□□□□□ -1.76
LIMK1P53667 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.07□□□□□ -1.76
LIMK1P53667 HMGB3P22-202ENST00000451823 572 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 NANOGP10-201ENST00000453325 895 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.07□□□□□ -1.76
LIMK1P53667 RPL5P24-201ENST00000463742 885 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 RPL21P104-201ENST00000464143 478 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AC010307.1-201ENST00000467206 836 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 VPS26AP1-201ENST00000483197 979 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 UBE2CP3-201ENST00000502715 450 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AC084024.2-201ENST00000503480 791 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AC016065.2-201ENST00000514530 444 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.07□□□□□ -1.76
LIMK1P53667 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.07□□□□□ -1.76
LIMK1P53667 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.07□□□□□ -1.76
LIMK1P53667 MTND1P6-201ENST00000523621 946 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.07□□□□□ -1.76
LIMK1P53667 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.07□□□□□ -1.76
LIMK1P53667 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.07□□□□□ -1.76
LIMK1P53667 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.07□□□□□ -1.76
LIMK1P53667 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.07□□□□□ -1.76
LIMK1P53667 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.07□□□□□ -1.76
LIMK1P53667 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LIMK1P53667 AC245884.10-201ENST00000597355 337 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.07□□□□□ -1.76
LIMK1P53667 GAS5-AS1-201ENST00000602767 694 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.07□□□□□ -1.76
LIMK1P53667 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LIMK1P53667 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AL157770.1-201ENST00000623049 439 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AC091905.2-201ENST00000623143 306 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 AC098679.5-201ENST00000624394 571 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.07□□□□□ -1.76
LIMK1P53667 OR4G3P-201ENST00000633500 913 ntBASIC4.07□□□□□ -1.76
LIMK1P53667 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.07□□□□□ -1.76
LIMK1P53667 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LIMK1P53667 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LIMK1P53667 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LIMK1P53667 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.07□□□□□ -1.76
LIMK1P53667 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LIMK1P53667 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LIMK1P53667 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LIMK1P53667 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
LIMK1P53667 MTND5P31-201ENST00000419366 1374 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 MTND4P10-201ENST00000446199 1363 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 ELL2P4-201ENST00000446870 1376 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 RNU6-335P-201ENST00000364563 113 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 RNU6-1300P-201ENST00000391046 108 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 ATP5F1P4-201ENST00000397288 746 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 AL121972.1-201ENST00000402023 252 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.06□□□□□ -1.76
LIMK1P53667 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.06□□□□□ -1.76
LIMK1P53667 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.06□□□□□ -1.76
LIMK1P53667 AC073335.1-201ENST00000427776 363 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 AP000907.1-201ENST00000428428 510 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 IFNNP1-201ENST00000429219 553 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 B3GNT2P1-201ENST00000434960 952 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.06□□□□□ -1.76
LIMK1P53667 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
LIMK1P53667 COX6CP18-201ENST00000448769 222 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 AC010301.1-201ENST00000473936 355 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 RPS4XP13-201ENST00000483219 789 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 AC005726.1-201ENST00000494679 427 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.06□□□□□ -1.76
LIMK1P53667 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 AC113420.1-201ENST00000507903 571 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 AC074250.1-201ENST00000511117 192 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.06□□□□□ -1.76
LIMK1P53667 RNU6-415P-201ENST00000516252 97 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.06□□□□□ -1.76
LIMK1P53667 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.06□□□□□ -1.76
LIMK1P53667 AC021749.1-201ENST00000604322 607 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 MIR432-201ENST00000606207 94 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 AC092354.2-201ENST00000607786 514 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.06□□□□□ -1.76
LIMK1P53667 AP001002.2-201ENST00000625137 386 ntBASIC4.06□□□□□ -1.76
LIMK1P53667 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LIMK1P53667 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LIMK1P53667 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
LIMK1P53667 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.05□□□□□ -1.76
LIMK1P53667 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIMK1P53667 AC018555.1-201ENST00000567548 1980 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.05□□□□□ -1.76
LIMK1P53667 DBF4P1-201ENST00000412976 1892 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 AC116096.1-201ENST00000566804 2314 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.05□□□□□ -1.76
LIMK1P53667 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIMK1P53667 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms