Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 Z74021.1-201ENST00000423610 407 ntBASIC4.66□□□□□ -1.66
COPAP53621 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.66□□□□□ -1.66
COPAP53621 OR4F13P-201ENST00000428478 931 ntBASIC4.66□□□□□ -1.66
COPAP53621 FTH1P6-201ENST00000430768 320 ntBASIC4.66□□□□□ -1.66
COPAP53621 ATP5C1P1-201ENST00000441945 895 ntBASIC4.66□□□□□ -1.66
COPAP53621 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.66□□□□□ -1.66
COPAP53621 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COPAP53621 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COPAP53621 SNRPGP5-201ENST00000456003 220 ntBASIC4.66□□□□□ -1.66
COPAP53621 MTCO2P18-201ENST00000457151 658 ntBASIC4.66□□□□□ -1.66
COPAP53621 RPL23AP65-201ENST00000475608 468 ntBASIC4.66□□□□□ -1.66
COPAP53621 AC068724.1-201ENST00000487100 792 ntBASIC4.66□□□□□ -1.66
COPAP53621 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.66□□□□□ -1.66
COPAP53621 AC093840.1-201ENST00000511599 336 ntBASIC4.66□□□□□ -1.66
COPAP53621 RNU6-150P-201ENST00000516237 95 ntBASIC4.66□□□□□ -1.66
COPAP53621 Y_RNA.695-201ENST00000516715 107 ntBASIC4.66□□□□□ -1.66
COPAP53621 AC008802.1-201ENST00000519121 791 ntBASIC4.66□□□□□ -1.66
COPAP53621 HIGD1AP10-201ENST00000527837 282 ntBASIC4.66□□□□□ -1.66
COPAP53621 AC007115.1-201ENST00000546853 234 ntBASIC4.66□□□□□ -1.66
COPAP53621 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.66□□□□□ -1.66
COPAP53621 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.66□□□□□ -1.66
COPAP53621 CENPUP2-201ENST00000555897 1186 ntBASIC4.66□□□□□ -1.66
COPAP53621 AL133457.1-201ENST00000564251 987 ntBASIC4.66□□□□□ -1.66
COPAP53621 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.66□□□□□ -1.66
COPAP53621 KPNA2P3-201ENST00000584190 848 ntBASIC4.66□□□□□ -1.66
COPAP53621 SLC25A36P1-201ENST00000590111 465 ntBASIC4.66□□□□□ -1.66
COPAP53621 AC103792.1-201ENST00000603591 919 ntBASIC4.66□□□□□ -1.66
COPAP53621 MTCYBP22-201ENST00000603788 447 ntBASIC4.66□□□□□ -1.66
COPAP53621 RNA5SP108-201ENST00000605921 117 ntBASIC4.66□□□□□ -1.66
COPAP53621 AL122126.1-201ENST00000546905 1318 ntBASIC4.66□□□□□ -1.66
COPAP53621 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPAP53621 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
COPAP53621 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.65□□□□□ -1.66
COPAP53621 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.65□□□□□ -1.66
COPAP53621 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COPAP53621 AC011978.2-201ENST00000569835 2054 ntBASIC4.65□□□□□ -1.66
COPAP53621 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.65□□□□□ -1.66
COPAP53621 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COPAP53621 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COPAP53621 RNA5SP28-201ENST00000363841 119 ntBASIC4.65□□□□□ -1.67
COPAP53621 SNORD116-4-201ENST00000384733 96 ntBASIC4.65□□□□□ -1.67
COPAP53621 AC016769.3-201ENST00000396562 315 ntBASIC4.65□□□□□ -1.67
COPAP53621 AL121972.1-201ENST00000402023 252 ntBASIC4.65□□□□□ -1.67
COPAP53621 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.65□□□□□ -1.67
COPAP53621 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.65□□□□□ -1.67
COPAP53621 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.65□□□□□ -1.67
COPAP53621 AC092832.1-201ENST00000422934 400 ntBASIC4.65□□□□□ -1.67
COPAP53621 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.65□□□□□ -1.67
COPAP53621 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COPAP53621 ZYG11AP1-201ENST00000430329 837 ntBASIC4.65□□□□□ -1.67
COPAP53621 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.65□□□□□ -1.67
COPAP53621 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.65□□□□□ -1.67
COPAP53621 TAF9P1-201ENST00000445421 515 ntBASIC4.65□□□□□ -1.67
COPAP53621 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.65□□□□□ -1.67
COPAP53621 ZNF114P1-201ENST00000453500 292 ntBASIC4.65□□□□□ -1.67
COPAP53621 TAF9P2-201ENST00000454958 515 ntBASIC4.65□□□□□ -1.67
COPAP53621 RPL7AP28-201ENST00000464513 571 ntBASIC4.65□□□□□ -1.67
COPAP53621 MTND4P2-201ENST00000507767 1203 ntBASIC4.65□□□□□ -1.67
COPAP53621 AC006499.2-201ENST00000513470 337 ntBASIC4.65□□□□□ -1.67
COPAP53621 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.65□□□□□ -1.67
COPAP53621 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.65□□□□□ -1.67
COPAP53621 RFPL1S-203ENST00000539579 330 ntBASIC4.65□□□□□ -1.67
COPAP53621 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COPAP53621 LARP7P2-201ENST00000575306 125 ntBASIC4.65□□□□□ -1.67
COPAP53621 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.65□□□□□ -1.67
COPAP53621 MAGOH2P-202ENST00000584384 429 ntBASIC4.65□□□□□ -1.67
COPAP53621 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.65□□□□□ -1.67
COPAP53621 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.65□□□□□ -1.67
COPAP53621 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.65□□□□□ -1.67
COPAP53621 AC020910.2-201ENST00000603635 610 ntBASIC4.65□□□□□ -1.67
COPAP53621 AC090425.2-201ENST00000608818 501 ntBASIC4.65□□□□□ -1.67
COPAP53621 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.65□□□□□ -1.67
COPAP53621 AC068831.8-201ENST00000620171 435 ntBASIC4.65□□□□□ -1.67
COPAP53621 C2orf27A-204ENST00000623058 969 ntBASIC4.65□□□□□ -1.67
COPAP53621 AL356596.1-201ENST00000624230 379 ntBASIC4.65□□□□□ -1.67
COPAP53621 AC012020.1-201ENST00000624541 1728 ntBASIC4.65□□□□□ -1.67
COPAP53621 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COPAP53621 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.65□□□□□ -1.67
COPAP53621 AC108467.2-201ENST00000617640 1597 ntBASIC4.65□□□□□ -1.67
COPAP53621 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COPAP53621 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
COPAP53621 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COPAP53621 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COPAP53621 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.64□□□□□ -1.67
COPAP53621 AP002907.1-201ENST00000606361 1430 ntBASIC4.64□□□□□ -1.67
COPAP53621 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.64□□□□□ -1.67
COPAP53621 AL672167.1-206ENST00000356293 943 ntBASIC4.64□□□□□ -1.67
COPAP53621 RNU6-660P-201ENST00000364566 109 ntBASIC4.64□□□□□ -1.67
COPAP53621 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COPAP53621 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COPAP53621 AL138880.1-201ENST00000405824 642 ntBASIC4.64□□□□□ -1.67
COPAP53621 TPMTP3-201ENST00000411928 735 ntBASIC4.64□□□□□ -1.67
COPAP53621 RPL7P8-201ENST00000411964 730 ntBASIC4.64□□□□□ -1.67
COPAP53621 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COPAP53621 AC083875.1-201ENST00000419509 405 ntBASIC4.64□□□□□ -1.67
COPAP53621 AL356387.2-201ENST00000422272 243 ntBASIC4.64□□□□□ -1.67
COPAP53621 EIF4EP1-201ENST00000422311 642 ntBASIC4.64□□□□□ -1.67
COPAP53621 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COPAP53621 AC096638.2-201ENST00000434965 711 ntBASIC4.64□□□□□ -1.67
COPAP53621 UBE2FP3-201ENST00000436366 524 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms