Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.61□□□□□ -1.67
COPB1P53618 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.61□□□□□ -1.67
COPB1P53618 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.61□□□□□ -1.67
COPB1P53618 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.61□□□□□ -1.67
COPB1P53618 RPL23AP35-201ENST00000451906 501 ntBASIC4.61□□□□□ -1.67
COPB1P53618 ZNF114P1-201ENST00000453500 292 ntBASIC4.61□□□□□ -1.67
COPB1P53618 RPL37P3-201ENST00000456825 293 ntBASIC4.61□□□□□ -1.67
COPB1P53618 RNU6-956P-201ENST00000458868 103 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AL672167.3-201ENST00000465951 960 ntBASIC4.61□□□□□ -1.67
COPB1P53618 RPS26P15-201ENST00000488067 348 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AK3P4-201ENST00000504283 583 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.61□□□□□ -1.67
COPB1P53618 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
COPB1P53618 HMGB1P28-201ENST00000507778 552 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.61□□□□□ -1.67
COPB1P53618 RNA5SP73-201ENST00000516744 108 ntBASIC4.61□□□□□ -1.67
COPB1P53618 SNORA48.10-201ENST00000516965 160 ntBASIC4.61□□□□□ -1.67
COPB1P53618 MTND1P5-201ENST00000517906 940 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AC027309.2-201ENST00000520566 192 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.61□□□□□ -1.67
COPB1P53618 AP000873.5-201ENST00000533906 236 ntBASIC4.61□□□□□ -1.67
COPB1P53618 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.61□□□□□ -1.67
COPB1P53618 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.61□□□□□ -1.67
COPB1P53618 OR6C7P-201ENST00000547875 934 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.61□□□□□ -1.67
COPB1P53618 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.61□□□□□ -1.67
COPB1P53618 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.61□□□□□ -1.67
COPB1P53618 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.61□□□□□ -1.67
COPB1P53618 AC093519.1-201ENST00000566109 298 ntBASIC4.61□□□□□ -1.67
COPB1P53618 MIR3611-201ENST00000584484 83 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AC115085.1-201ENST00000588924 229 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AC093765.1-201ENST00000603758 881 ntBASIC4.61□□□□□ -1.67
COPB1P53618 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.61□□□□□ -1.67
COPB1P53618 MIR6758-201ENST00000620653 63 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AL590240.3-201ENST00000621416 943 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AL359740.1-201ENST00000624340 592 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AC120349.2-201ENST00000625002 298 ntBASIC4.61□□□□□ -1.67
COPB1P53618 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.61□□□□□ -1.67
COPB1P53618 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPB1P53618 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COPB1P53618 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
COPB1P53618 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPB1P53618 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPB1P53618 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
COPB1P53618 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
COPB1P53618 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.6□□□□□ -1.67
COPB1P53618 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COPB1P53618 RN7SKP227-201ENST00000364445 330 ntBASIC4.6□□□□□ -1.67
COPB1P53618 Y_RNA.302-201ENST00000364997 102 ntBASIC4.6□□□□□ -1.67
COPB1P53618 RNU6-178P-201ENST00000384631 104 ntBASIC4.6□□□□□ -1.67
COPB1P53618 DEFB108C-201ENST00000400154 252 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AL049693.1-201ENST00000402760 611 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AL450338.1-201ENST00000407987 512 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.6□□□□□ -1.67
COPB1P53618 AF274854.1-201ENST00000413236 615 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AC004022.2-201ENST00000413824 193 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AC234782.4-201ENST00000417646 1048 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.6□□□□□ -1.67
COPB1P53618 RPL23AP1-201ENST00000428990 471 ntBASIC4.6□□□□□ -1.67
COPB1P53618 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.6□□□□□ -1.67
COPB1P53618 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.6□□□□□ -1.67
COPB1P53618 B3GNT2P1-201ENST00000434960 952 ntBASIC4.6□□□□□ -1.67
COPB1P53618 LARP1BP3-201ENST00000437229 869 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.6□□□□□ -1.67
COPB1P53618 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.6□□□□□ -1.67
COPB1P53618 AL451050.1-201ENST00000450126 415 ntBASIC4.6□□□□□ -1.67
COPB1P53618 RPS29P19-201ENST00000479709 171 ntBASIC4.6□□□□□ -1.67
COPB1P53618 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.6□□□□□ -1.67
COPB1P53618 SNX5P1-201ENST00000505757 1041 ntBASIC4.6□□□□□ -1.67
COPB1P53618 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.6□□□□□ -1.67
COPB1P53618 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.6□□□□□ -1.67
COPB1P53618 MTCO1P30-201ENST00000515244 580 ntBASIC4.6□□□□□ -1.67
COPB1P53618 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.6□□□□□ -1.67
COPB1P53618 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.6□□□□□ -1.67
COPB1P53618 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.6□□□□□ -1.67
COPB1P53618 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.6□□□□□ -1.67
COPB1P53618 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COPB1P53618 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.6□□□□□ -1.67
COPB1P53618 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.6□□□□□ -1.67
COPB1P53618 AC027807.1-201ENST00000559921 996 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AC022146.1-201ENST00000595307 847 ntBASIC4.6□□□□□ -1.67
COPB1P53618 RPL12P25-202ENST00000598100 674 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AC091488.1-201ENST00000604239 660 ntBASIC4.6□□□□□ -1.67
COPB1P53618 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.6□□□□□ -1.67
COPB1P53618 AC128687.1-201ENST00000605304 619 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AC087752.4-201ENST00000605911 462 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AL354760.1-201ENST00000608357 643 ntBASIC4.6□□□□□ -1.67
COPB1P53618 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.6□□□□□ -1.67
COPB1P53618 AC025594.3-201ENST00000613068 790 ntBASIC4.6□□□□□ -1.67
COPB1P53618 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.6□□□□□ -1.67
COPB1P53618 AC100793.4-201ENST00000613683 429 ntBASIC4.6□□□□□ -1.67
COPB1P53618 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.6□□□□□ -1.67
COPB1P53618 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms