Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEK3P51956 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEK3P51956 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEK3P51956 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NEK3P51956 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEK3P51956 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NEK3P51956 RNU6-433P-201ENST00000363216 104 ntBASIC4.69□□□□□ -1.66
NEK3P51956 RNA5SP151-201ENST00000365632 117 ntBASIC4.69□□□□□ -1.66
NEK3P51956 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEK3P51956 RNA5SP239-201ENST00000410218 129 ntBASIC4.69□□□□□ -1.66
NEK3P51956 RN7SKP177-201ENST00000410567 355 ntBASIC4.69□□□□□ -1.66
NEK3P51956 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.69□□□□□ -1.66
NEK3P51956 RPS7P15-201ENST00000415804 584 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AC245052.5-201ENST00000416320 649 ntBASIC4.69□□□□□ -1.66
NEK3P51956 USP9YP26-201ENST00000421008 661 ntBASIC4.69□□□□□ -1.66
NEK3P51956 COX6CP17-201ENST00000421389 185 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AC009480.2-201ENST00000422916 432 ntBASIC4.69□□□□□ -1.66
NEK3P51956 PDSS1P1-201ENST00000422953 1114 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.69□□□□□ -1.66
NEK3P51956 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.69□□□□□ -1.66
NEK3P51956 MTATP6P26-201ENST00000445926 662 ntBASIC4.69□□□□□ -1.66
NEK3P51956 RPL7P52-201ENST00000449200 742 ntBASIC4.69□□□□□ -1.66
NEK3P51956 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.69□□□□□ -1.66
NEK3P51956 ARPC3P2-201ENST00000457786 533 ntBASIC4.69□□□□□ -1.66
NEK3P51956 snoU13.8-201ENST00000458890 104 ntBASIC4.69□□□□□ -1.66
NEK3P51956 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEK3P51956 AC104763.1-201ENST00000475274 360 ntBASIC4.69□□□□□ -1.66
NEK3P51956 RN7SL41P-201ENST00000476144 297 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AC023424.2-201ENST00000493479 777 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AC078918.1-201ENST00000498515 228 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AC112198.1-201ENST00000505369 1220 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AC022447.3-201ENST00000506865 495 ntBASIC4.69□□□□□ -1.66
NEK3P51956 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.69□□□□□ -1.66
NEK3P51956 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.69□□□□□ -1.66
NEK3P51956 AC010486.3-201ENST00000511602 785 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.69□□□□□ -1.66
NEK3P51956 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.69□□□□□ -1.66
NEK3P51956 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.69□□□□□ -1.66
NEK3P51956 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.69□□□□□ -1.66
NEK3P51956 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.69□□□□□ -1.66
NEK3P51956 AC135628.1-201ENST00000568867 534 ntBASIC4.69□□□□□ -1.66
NEK3P51956 SNRPGP15-201ENST00000600149 222 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AL392048.1-201ENST00000613946 534 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AL356596.1-201ENST00000624230 379 ntBASIC4.69□□□□□ -1.66
NEK3P51956 AC092447.10-201ENST00000620607 1652 ntBASIC4.69□□□□□ -1.66
NEK3P51956 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
NEK3P51956 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NEK3P51956 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NEK3P51956 AC108467.2-201ENST00000617640 1597 ntBASIC4.69□□□□□ -1.66
NEK3P51956 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NEK3P51956 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEK3P51956 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEK3P51956 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEK3P51956 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NEK3P51956 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.69□□□□□ -1.66
NEK3P51956 AC015813.6-201ENST00000624409 5808 ntBASIC4.68□□□□□ -1.66
NEK3P51956 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NEK3P51956 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEK3P51956 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
NEK3P51956 AC105074.1-201ENST00000623380 3095 ntBASIC4.68□□□□□ -1.66
NEK3P51956 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NEK3P51956 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEK3P51956 RNU6-359P-201ENST00000365466 108 ntBASIC4.68□□□□□ -1.66
NEK3P51956 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.68□□□□□ -1.66
NEK3P51956 MIR129-1-201ENST00000384972 72 ntBASIC4.68□□□□□ -1.66
NEK3P51956 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.68□□□□□ -1.66
NEK3P51956 UQCRBP1-201ENST00000421129 336 ntBASIC4.68□□□□□ -1.66
NEK3P51956 Z99497.1-201ENST00000421282 135 ntBASIC4.68□□□□□ -1.66
NEK3P51956 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.68□□□□□ -1.66
NEK3P51956 CENPIP1-201ENST00000425713 902 ntBASIC4.68□□□□□ -1.66
NEK3P51956 AC016712.1-201ENST00000431088 378 ntBASIC4.68□□□□□ -1.66
NEK3P51956 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.68□□□□□ -1.66
NEK3P51956 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.68□□□□□ -1.66
NEK3P51956 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.68□□□□□ -1.66
NEK3P51956 MTCO3P16-201ENST00000454456 754 ntBASIC4.68□□□□□ -1.66
NEK3P51956 RPL23AP65-201ENST00000475608 468 ntBASIC4.68□□□□□ -1.66
NEK3P51956 BET1P1-201ENST00000482276 359 ntBASIC4.68□□□□□ -1.66
NEK3P51956 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.68□□□□□ -1.66
NEK3P51956 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.68□□□□□ -1.66
NEK3P51956 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.68□□□□□ -1.66
NEK3P51956 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.68□□□□□ -1.66
NEK3P51956 AC108064.1-201ENST00000513791 460 ntBASIC4.68□□□□□ -1.66
NEK3P51956 RNA5SP497-201ENST00000516081 97 ntBASIC4.68□□□□□ -1.66
NEK3P51956 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.68□□□□□ -1.66
NEK3P51956 AP004371.1-201ENST00000525240 214 ntBASIC4.68□□□□□ -1.66
NEK3P51956 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.68□□□□□ -1.66
NEK3P51956 AC018630.1-201ENST00000541376 925 ntBASIC4.68□□□□□ -1.66
NEK3P51956 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.68□□□□□ -1.66
NEK3P51956 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.68□□□□□ -1.66
NEK3P51956 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.68□□□□□ -1.66
NEK3P51956 AC069061.3-201ENST00000582254 823 ntBASIC4.68□□□□□ -1.66
NEK3P51956 AP001004.1-201ENST00000582468 324 ntBASIC4.68□□□□□ -1.66
NEK3P51956 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.68□□□□□ -1.66
NEK3P51956 AL109653.1-201ENST00000603091 248 ntBASIC4.68□□□□□ -1.66
NEK3P51956 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.68□□□□□ -1.66
NEK3P51956 AL163642.2-201ENST00000604722 1019 ntBASIC4.68□□□□□ -1.66
NEK3P51956 MIR7844-201ENST00000616161 122 ntBASIC4.68□□□□□ -1.66
NEK3P51956 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.68□□□□□ -1.66
NEK3P51956 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.68□□□□□ -1.66
NEK3P51956 AC006927.3-201ENST00000638789 384 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms